RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 IRF1P10914 325 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 VDRP11473 427 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 AMPD2Q01433 879 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 GRSF1Q12849 480 aaKnown RBP eCLIP15.55■□□□□ 0.08
USE1-202ENST00000445667 ZNF528Q3MIS6 628 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 DPCR1Q3MIW9 517 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 MAMSTRQ6ZN01 415 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 SCD5Q86SK9 330 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
USE1-202ENST00000445667 UBA3Q8TBC4 463 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 P2RY13Q9BPV8 354 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
USE1-202ENST00000445667 PRMT8Q9NR22 394 aaPredicted RBP15.55■□□□□ 0.08
USE1-202ENST00000445667 NAGPAQ9UK23 515 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 USP3Q9Y6I4 520 aa15.55■□□□□ 0.08
USE1-202ENST00000445667 E2F8A0AVK6 867 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 MDM4O15151 490 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 RARGP13631 454 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 HOXC13P31276 330 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CXCL12P48061 93 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CCR3P51677 355 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 PDE4CQ08493 712 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 DHCR24Q15392 516 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 TPD52L1Q16890 204 aaPredicted RBP15.54■□□□□ 0.08
USE1-202ENST00000445667 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 SPEM1Q8N4L4 309 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 TFAP2BQ92481 460 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CD101Q93033 1021 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 KREMEN1Q96MU8 473 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
USE1-202ENST00000445667 GBP4Q96PP9 640 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CRACR2AQ9BSW2 395 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 IER2Q9BTL4 223 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 KLF16Q9BXK1 252 aaPredicted RBP15.54■□□□□ 0.08
USE1-202ENST00000445667 UBXN6Q9BZV1 441 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 CYLDQ9NQC7 956 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
USE1-202ENST00000445667 HESX1Q9UBX0 185 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 KIAA1257Q9ULG3 409 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 SH3BP1Q9Y3L3 701 aa15.54■□□□□ 0.08
USE1-202ENST00000445667 O00370 1275 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 SLC9A3R1O14745 358 aaPredicted RBP15.53■□□□□ 0.08
USE1-202ENST00000445667 CYP17A1P05093 508 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 TDGF1P13385 188 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 ATP5C1P36542 298 aaKnown RBP15.53■□□□□ 0.08
USE1-202ENST00000445667 OPRD1P41143 372 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 BCAT1P54687 386 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 SLC8A3P57103 927 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 GCNT1Q02742 428 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 GAB4Q2WGN9 574 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 RAB41Q5JT25 222 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 C10orf120Q5SQS8 335 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 RHBDF2Q6PJF5 856 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 ZC3H14Q6PJT7 736 aaKnown RBP15.53■□□□□ 0.08
USE1-202ENST00000445667 SYNPOQ8N3V7 929 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 KIAA1958Q8N8K9 716 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 GPT2Q8TD30 523 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 NDRG1Q92597 394 aaKnown RBP15.53■□□□□ 0.08
USE1-202ENST00000445667 EZH1Q92800 747 aaPredicted RBP15.53■□□□□ 0.08
USE1-202ENST00000445667 ZSWIM1Q9BR11 485 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 ZSCAN32Q9NX65 697 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 TBC1D14Q9P2M4 693 aa15.53■□□□□ 0.08
USE1-202ENST00000445667 VPS13AQ96RL7 3174 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 MYO15AQ9UKN7 3530 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 XPO1O14980 1071 aaKnown RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 PAEPP09466 180 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 SLC9A1P19634 815 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 DRD1P21728 446 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 BRD2P25440 801 aaKnown RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 MTIF2P46199 727 aaKnown RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 SLC6A11P48066 632 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 TKTL1P51854 596 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 APBA1Q02410 837 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 BST2Q10589 180 aaKnown RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 GJB7Q6PEY0 223 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 BBS7Q8IWZ6 715 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 RBBP8NLQ8NC74 664 aaPredicted RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 ZBTB44Q8NCP5 570 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 ATRIPQ8WXE1 791 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 NELL1Q92832 810 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 UBE2TQ9NPD8 197 aaPredicted RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
USE1-202ENST00000445667 DNMT3LQ9UJW3 386 aa15.52■□□□□ 0.08
USE1-202ENST00000445667 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 MYO16Q9Y6X6 1858 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 GREM1O60565 184 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 RNF40O75150 1001 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 LMNAP02545 664 aaKnown RBP15.51■□□□□ 0.07
USE1-202ENST00000445667 RALAP11233 206 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 PSEN1P49768 467 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 DMWDQ09019 674 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 PPP2R5DQ14738 602 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 CNGA2Q16280 664 aa15.51■□□□□ 0.07
USE1-202ENST00000445667 PKDCCQ504Y2 493 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms