RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 ZC3H11AO75152 810 aaKnown RBP eCLIP12.09□□□□□ -0.47
HCFC1-203ENST00000444191 PGM3O95394 542 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 NEK3P51956 506 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 MCL1Q07820 350 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 MED21Q13503 144 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 RAB6CQ53S08 254 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 VWA5B1Q5TIE3 1220 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 ACOT1Q86TX2 421 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 ST13P4Q8IZP2 240 aaPredicted RBP12.09□□□□□ -0.47
HCFC1-203ENST00000444191 MCUQ8NE86 351 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 PPWD1Q96BP3 646 aaKnown RBP12.09□□□□□ -0.47
HCFC1-203ENST00000444191 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 RAB6CQ9H0N0 254 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 PCNTO95613 3336 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 CLUHO75153 1309 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 P4HA1P13674 534 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 GLRBP48167 497 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 VSIG10LQ86VR7 867 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 PAF1Q8N7H5 531 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 MIPEPQ99797 713 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 EBF4Q9BQW3 602 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 PRKAG3Q9UGI9 489 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 COQ4Q9Y3A0 265 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 ACTL7BQ9Y614 415 aa12.09□□□□□ -0.47
HCFC1-203ENST00000444191 NDC80O14777 642 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 DCXO43602 365 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 T-ENOLP0DO92 83 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 HSD17B4P51659 736 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 PARP6Q2NL67 630 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 PID1Q7Z2X4 250 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 DEFB107AQ8IZN7 70 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 MAB21L3Q8N8X9 362 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 ZNF184Q99676 751 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 TEX13BQ9BXU2 312 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 E5RJQ4 531 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 CYP1A1P04798 512 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 DSG1Q02413 1049 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 DEUP1Q05D60 604 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 KLF1Q13351 362 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 ITGA9Q13797 1035 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 FASTKD1Q53R41 847 aaKnown RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 TRMT10BQ6PF06 316 aaKnown RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
HCFC1-203ENST00000444191 FBXO27Q8NI29 283 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 FAM172AQ8WUF8 416 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 LPAR1Q92633 364 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 RSAD1Q9HA92 442 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 UBP1Q9NZI7 540 aa12.08□□□□□ -0.48
HCFC1-203ENST00000444191 TM9SF1O15321 606 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 PFDN1O60925 122 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 MT-CO1P00395 513 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 EGFRP00533 1210 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 LINGO3P0C6S8 592 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 CCNB1P14635 433 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 CXCL9Q07325 125 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 FAM131BQ86XD5 332 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 SAMD3Q8N6K7 520 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 USP13Q92995 863 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 KLHL8Q9P2G9 620 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 CXorf49A8MYA2 514 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 ABHD2P08910 425 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 GPD1P21695 349 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 ARL4AP40617 200 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 MLH1P40692 756 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 SKIV2L2P42285 1042 aaKnown RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 GCNAQ96QF7 691 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 RNPEPQ9H4A4 650 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 C17orf75Q9HAS0 396 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 ZNF536O15090 1300 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 DDX60LQ5H9U9 1706 aaKnown RBP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 OGTO15294 1046 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 PRPF4O43172 522 aaKnown RBP eCLIP12.07□□□□□ -0.48
HCFC1-203ENST00000444191 GRIA1P42261 906 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 FSTL1Q12841 308 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 CAPSQ13938 189 aa12.07□□□□□ -0.48
HCFC1-203ENST00000444191 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms