RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SYNCRIPO60506 623 aaKnown RBP14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 GMNNO75496 209 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 KRT38O76015 456 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 RETSATQ6NUM9 610 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 EMBQ6PCB8 327 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 IPMKQ8NFU5 416 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 MID2Q9UJV3 735 aa14.65□□□□□ -0.07
SMARCA4-204ENST00000444061 TAF1P21675 1872 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 CLGNO14967 610 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 TSPAN3O60637 253 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SPATA31D3P0C874 917 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 LAMB3Q13751 1172 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 DDR2Q16832 855 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 PREPLQ4J6C6 727 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SPATA31D4Q6ZUB0 917 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 DAW1Q8N136 415 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 USP13Q92995 863 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM118BQ9BPY3 351 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 MRPL45Q9BRJ2 306 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 OXCT2Q9BYC2 517 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC30A1Q9Y6M5 507 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 A0A0U1RQF3 1178 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 GOLGA8KD6RF30 607 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SYN3O14994 580 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 TROVE2P10155 538 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 CLNS1AP54105 237 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC10A6Q3KNW5 377 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 EMID1Q96A84 441 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 MS4A14Q96JA4 679 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 RILPQ96NA2 401 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 PARD6BQ9BYG5 372 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 OSGEPQ9NPF4 335 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 CCDC151A5D8V7 595 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 CBX4O00257 560 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 RGS20O76081 388 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 STARD3Q14849 445 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 TIGD7Q6NT04 549 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 LMNTD2Q8IXW0 634 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 FAM71AQ8IYT1 594 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 RSPH1Q8WYR4 309 aa14.64□□□□□ -0.07
SMARCA4-204ENST00000444061 DDX3XO00571 662 aaKnown RBP eCLIP14.63□□□□□ -0.072e-25■□□□□ 10.8
SMARCA4-204ENST00000444061 NOS2P35228 1153 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ZBED8Q8IZ13 594 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 HIF1AQ16665 826 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 MIIPQ5JXC2 388 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 PPM1NQ8N819 430 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ATAD1Q8NBU5 361 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 GPR63Q9BZJ6 419 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 KCNF1Q9H3M0 494 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 DNMT3LQ9UJW3 386 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 A0A0A6YYK5 440 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 VGLL3A8MV65 326 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 RNF40O75150 1001 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 GTF2H3Q13889 308 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 TFDP3Q5H9I0 405 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ERMARDQ5T6L9 678 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 VSTM1Q6UX27 236 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 LGI2Q8N0V4 545 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 DCLK2Q8N568 766 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 PPFIBP2Q8ND30 876 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ALKBH8Q96BT7 664 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ACP6Q9NPH0 428 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 AVENQ9NQS1 362 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ZNF185O15231 689 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ANXA9O76027 345 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 CDC25CP30307 473 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 EIF3BP55884 814 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 GEMIN4P57678 1058 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 RAB30Q15771 203 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 HP1BP3Q5SSJ5 553 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 WDR59Q6PJI9 974 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 SLC13A5Q86YT5 568 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 C12orf29Q8N999 325 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 UBXN6Q9BZV1 441 aa14.63□□□□□ -0.07
SMARCA4-204ENST00000444061 ESYT3A0FGR9 886 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 CLDN5O00501 218 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 MAP3K6O95382 1288 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 RHOAP61586 193 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 CENPCQ03188 943 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 MAPK7Q13164 816 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 ANKRD20A3Q5VUR7 823 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■■■□□ 16.1
SMARCA4-204ENST00000444061 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 RAMP2O60895 175 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 ENDOD1O94919 500 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 COL6A1P12109 1028 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 RARGP13631 454 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 GABRR2P28476 465 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 STIP1P31948 543 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 TUBP50607 506 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 MARSP56192 900 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 LILRA4P59901 499 aa14.62□□□□□ -0.07
SMARCA4-204ENST00000444061 KLHL38Q2WGJ6 581 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms