RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 MBL2P11226 248 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ATP5C1P36542 298 aaKnown RBP11.39□□□□□ -0.59
HDAC6-211ENST00000443563 GPD2P43304 727 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 KLK7P49862 253 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 UBASH3AP57075 661 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF445P59923 1031 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 GPC5P78333 572 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 FANCCQ00597 558 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 PRKCQQ04759 706 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ADIGQ0VDE8 80 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 GRM2Q14416 872 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 TMEM31Q5JXX7 168 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 BMP8AQ7Z5Y6 402 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF677Q86XU0 584 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-211ENST00000443563 IRGQQ8WZA9 623 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 GOLGA1Q92805 767 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 MSANTD3Q96H12 275 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 SLC22A12Q96S37 553 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ZSWIM1Q9BR11 485 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 TRIM62Q9BVG3 475 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ULBP1Q9BZM6 244 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 LHX5Q9H2C1 402 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 MFSD1Q9H3U5 465 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 NLRC4Q9NPP4 1024 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 ST7Q9NRC1 585 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 OLA1Q9NTK5 396 aaKnown RBP11.39□□□□□ -0.59
HDAC6-211ENST00000443563 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 A0A1W2PQH9 124 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 TULP2O00295 520 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-211ENST00000443563 TEX33O43247 280 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 COCHO43405 550 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 CALCAP01258 141 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 RARGP13631 454 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 LCP1P13796 627 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 GLULP15104 373 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 CYP11B1P15538 503 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SOX5P35711 763 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 RGS7P49802 495 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 MLLT6P55198 1093 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-211ENST00000443563 JAM2P57087 298 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC6-211ENST00000443563 USP4Q13107 963 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 MTF1Q14872 753 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 NR1I3Q14994 352 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF77Q15935 545 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 PMF1Q6P1K2 205 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 DENND1BQ6P3S1 775 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 C1orf228Q6PIY5 440 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SLC47A2Q86VL8 602 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 MSANTD4Q8NCY6 345 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SH3RF2Q8TEC5 729 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 RSPRY1Q96DX4 576 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 ASIC4Q96FT7 647 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SMG9Q9H0W8 520 aaKnown RBP11.38□□□□□ -0.59
HDAC6-211ENST00000443563 SMOC2Q9H3U7 446 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 CCSER2Q9H7U1 834 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 ARHGEF3Q9NR81 526 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 ABCC13Q9NSE7 274 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC6-211ENST00000443563 DNMT3LQ9UJW3 386 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 MYO6Q9UM54 1294 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 CPQQ9Y646 472 aa11.38□□□□□ -0.59
HDAC6-211ENST00000443563 LEFTY2O00292 366 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 GFPT2O94808 682 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 IFNAR2P48551 515 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 RPL34P49207 117 aaKnown RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 DAOAP59103 153 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 AMPD2Q01433 879 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 PDGFRLQ15198 375 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 MLF2Q15773 248 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 RSRC2Q7L4I2 434 aaKnown RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 SUGP1Q8IWZ8 645 aaKnown RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 SIX5Q8N196 739 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 OSCP1Q8WVF1 389 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 ATP2A3Q93084 1043 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 EXOC4Q96A65 974 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 NAP1L5Q96NT1 182 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-211ENST00000443563 NUP58Q9BVL2 599 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 SLC4A5Q9BY07 1137 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 MIS12Q9H081 205 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 C8orf33Q9H7E9 229 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms