RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 VAMP1P23763 118 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 GJA4P35212 333 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 ASPAP45381 313 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SLC5A3P53794 718 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 PPP3CAQ08209 521 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 NFIL3Q16649 462 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 EDRF1Q3B7T1 1238 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 TCERG1LQ5VWI1 586 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 KRT39Q6A163 491 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 KLHL10Q6JEL2 608 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 UNC93AQ86WB7 457 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 DCLK2Q8N568 766 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 C12orf29Q8N999 325 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SCAMP5Q8TAC9 235 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 TAS1R2Q8TE23 839 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 TMEM30AQ9NV96 361 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SMG5Q9UPR3 1016 aaKnown RBP9.27□□□□□ -0.93
USP6NL-203ENST00000443016 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 CPQQ9Y646 472 aa9.27□□□□□ -0.93
USP6NL-203ENST00000443016 SPTBN2O15020 2390 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 LEFTY2O00292 366 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 NFATC1O95644 943 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 ADORA2BP29275 332 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 MAP3K7CLP57077 242 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 USP4Q13107 963 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 LPAL2Q16609 132 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 TPD52L1Q16890 204 aaPredicted RBP9.26□□□□□ -0.93
USP6NL-203ENST00000443016 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 C1orf220Q5T0J3 134 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 C11orf57Q6ZUT1 292 aaPredicted RBP9.26□□□□□ -0.93
USP6NL-203ENST00000443016 JAZF1Q86VZ6 243 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 TMEM8AQ9HCN3 771 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 HMGXB4Q9UGU5 601 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 TRDMT1O14717 391 aaKnown RBP9.26□□□□□ -0.93
USP6NL-203ENST00000443016 SCAMP3O14828 347 aaKnown RBP9.26□□□□□ -0.93
USP6NL-203ENST00000443016 STX10O60499 249 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 RNF40O75150 1001 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 FAM200BP0CF97 657 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 DRD1P21728 446 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 PRCPP42785 496 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 MXI1P50539 228 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 GALK1P51570 392 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 MYL5Q02045 173 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 VAC14Q08AM6 782 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 EML3Q32P44 896 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 ZCWPW2Q504Y3 356 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 DCAF17Q5H9S7 520 aaPredicted RBP9.26□□□□□ -0.93
USP6NL-203ENST00000443016 ZFYVE27Q5T4F4 411 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 NELFBQ8WX92 580 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 JAKMIP2Q96AA8 810 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 CHFRQ96EP1 664 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 EPC1Q9H2F5 836 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 RWDD2AQ9UIY3 292 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 GMEB2Q9UKD1 530 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 SLC8A2Q9UPR5 921 aa9.26□□□□□ -0.93
USP6NL-203ENST00000443016 PATJQ8NI35 1801 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 COL4A2P08572 1712 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 GOLGA6L3A6NEY3 463 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CHURC1-FNTBB4DL54 471 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 SLC9A3R1O14745 358 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 BMP6P22004 513 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FNTBP49356 437 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 SLC7A9P82251 487 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FKBP3Q00688 224 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 LRRC63Q05C16 580 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 SIM2Q14190 667 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FBXO43Q4G163 708 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 HECTD3Q5T447 861 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FSTL4Q6MZW2 842 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 DDX42Q86XP3 938 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FBXL13Q8NEE6 735 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 OVCA2Q8WZ82 227 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 NELL1Q92832 810 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CD101Q93033 1021 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CYFIP2Q96F07 1278 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FBXO44Q9H4M3 255 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CYP3A43Q9HB55 503 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FBRSL1Q9HCM7 1045 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 LILRB5O75023 590 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 OAS1P00973 400 aaKnown RBP9.25□□□□□ -0.93
USP6NL-203ENST00000443016 EGFP01133 1207 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 GTF2H1P32780 548 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 ID4P47928 161 aa9.25□□□□□ -0.93
USP6NL-203ENST00000443016 ZXDBP98169 803 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms