RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 RDM1Q8NG50 284 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CCDC110Q8TBZ0 833 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 JDP2Q8WYK2 163 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 RILPQ96NA2 401 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 IMPG2Q9BZV3 1241 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 PHACTR1Q9C0D0 580 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 DOCK5Q9H7D0 1870 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 COL4A5P29400 1685 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 A0A0B4J269 797 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 HNRNPCL1O60812 293 aaKnown RBP14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CALB1P05937 261 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 ZNF24P17028 368 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 ZNF132P52740 706 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 ZNF200P98182 395 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-218ENST00000442625 SLC25A3Q00325 362 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 LAMB3Q13751 1172 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 DBN1Q16643 649 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CNPY1Q3B7I2 92 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 LPCAT4Q643R3 524 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 SH2D5Q6ZV89 423 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CCDC33Q8N5R6 958 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 TCHPQ9BT92 498 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CALN1Q9BXU9 219 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 UBE2OQ9C0C9 1292 aaKnown RBP14.69□□□□□ -0.06
MCF2L-218ENST00000442625 SSU72Q9NP77 194 aaKnown RBP14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CISHQ9NSE2 258 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 ZNF212Q9UDV6 495 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 CNTN6Q9UQ52 1028 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 STYXL1Q9Y6J8 313 aa14.69□□□□□ -0.06
MCF2L-218ENST00000442625 COPEO14579 308 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 FSTL1Q12841 308 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 CDC16Q13042 620 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 CIAPIN1Q6FI81 312 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 FAM83AQ86UY5 434 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 ECSITQ9BQ95 431 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 GORASP1Q9BQQ3 440 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 CNTN3Q9P232 1028 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 CAPN14A8MX76 684 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 LRCH4O75427 683 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 EIF3EP60228 445 aaKnown RBP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 KRT72Q14CN4 511 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 XKR3Q5GH77 459 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 RALGPS1Q5JS13 557 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 DENND1BQ6P3S1 775 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 TMEM35BQ8NCS4 154 aa14.68□□□□□ -0.06
MCF2L-218ENST00000442625 CCDC124Q96CT7 223 aaKnown RBP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 ASCC2Q9H1I8 757 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 MAP3K20Q9NYL2 800 aaKnown RBP14.68□□□□□ -0.06
MCF2L-218ENST00000442625 STAM2O75886 525 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PDE5AO76074 875 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 RBP3P10745 1247 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 CD19P15391 556 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 RAP1GAPP47736 663 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 MRPS5P82675 430 aaKnown RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PDE1BQ01064 536 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PIGHQ14442 188 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 ACBD5Q5T8D3 534 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 LRRC38Q5VT99 294 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 RNF111Q6ZNA4 994 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 ANKRD13AQ8IZ07 590 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 SMC1BQ8NDV3 1235 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PORCNQ9H237 461 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 CYTH4Q9UIA0 394 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PLA2G4CQ9UP65 541 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 IQANK1A0A1B0GTG1 560 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 F5H423 210 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 LYPLA1O75608 230 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 C6orf222P0C671 652 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 GMPRP36959 345 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 EPHB1P54762 984 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 OSTNP61366 133 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 TGFB2P61812 414 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 DSG1Q02413 1049 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 PTPN20Q4JDL3 420 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 NSUN6Q8TEA1 469 aaKnown RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 SLC44A1Q8WWI5 657 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 NDE1Q9NXR1 346 aa14.67□□□□□ -0.06
MCF2L-218ENST00000442625 NXF1Q9UBU9 619 aaKnown RBP14.67□□□□□ -0.06
MCF2L-218ENST00000442625 ARHGAP42A6NI28 874 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 A6NJR5 290 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 H0YCG3 227 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 ASS1P00966 412 aaKnown RBP14.66□□□□□ -0.06
MCF2L-218ENST00000442625 SUPT20HL2P0C7V6 817 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 KDELR1P24390 212 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
MCF2L-218ENST00000442625 SLC25A11Q02978 314 aaKnown RBP14.66□□□□□ -0.06
MCF2L-218ENST00000442625 SUPT20HL1Q3ZLR7 823 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 SLFN12LQ6IEE8 588 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 CDR2LQ86X02 465 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-218ENST00000442625 TMPRSS6Q8IU80 811 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 UBR7Q8N806 425 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 TTLL6Q8N841 843 aa14.66□□□□□ -0.06
MCF2L-218ENST00000442625 SPATA18Q8TC71 538 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms