RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 GPRIN1Q7Z2K8 1008 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 SLC9A9Q8IVB4 645 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 NAT16Q8N8M0 369 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 C12orf29Q8N999 325 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 PDZD8Q8NEN9 1154 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 SLC2A14Q8TDB8 520 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 OVCA2Q8WZ82 227 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 PNKPQ96T60 521 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 EDEM2Q9BV94 578 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 ATP8B3O60423 1300 aa19.25■□□□□ 0.67
GTF3A-204ENST00000438571 FAM92AA1XBS5 289 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 SLC9A3R1O14745 358 aaPredicted RBP19.24■□□□□ 0.67
GTF3A-204ENST00000438571 ADAM23O75077 832 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 RHOBTB1O94844 696 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 CAVIN2O95810 425 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 APODP05090 189 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 EIF2DP41214 584 aaKnown RBP19.24■□□□□ 0.67
GTF3A-204ENST00000438571 MAP3K7CLP57077 242 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 MRPS21P82921 87 aaKnown RBP19.24■□□□□ 0.67
GTF3A-204ENST00000438571 HECTD3Q5T447 861 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 SNX30Q5VWJ9 437 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 CEP135Q66GS9 1140 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 RNF43Q68DV7 783 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 SV2AQ7L0J3 742 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 DDX42Q86XP3 938 aaKnown RBP eCLIP19.24■□□□□ 0.67
GTF3A-204ENST00000438571 ETFBKMTQ8IXQ9 262 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 KIAA1958Q8N8K9 716 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 GOLGA5Q8TBA6 731 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 JAKMIP2Q96AA8 810 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 TNIP3Q96KP6 325 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 HCN2Q9UL51 889 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
GTF3A-204ENST00000438571 PCDH15Q96QU1 1955 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 E2F8A0AVK6 867 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 LNP1A1A4G5 178 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 ADH1CP00326 375 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 TRIM49P0CI25 452 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 TRIM49CP0CI26 452 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 ADORA2BP29275 332 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 AP3M2P53677 418 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 OLIG1Q8TAK6 271 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 APOBEC3GQ9HC16 384 aaKnown RBP19.23■□□□□ 0.67
GTF3A-204ENST00000438571 OSER1Q9NX31 292 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 CFAP45Q9UL16 551 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 SH3BP1Q9Y3L3 701 aa19.23■□□□□ 0.67
GTF3A-204ENST00000438571 TBX18O95935 607 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 ASS1P00966 412 aaKnown RBP19.22■□□□□ 0.67
GTF3A-204ENST00000438571 PMLP29590 882 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 USP39Q53GS9 565 aaKnown RBP19.22■□□□□ 0.67
GTF3A-204ENST00000438571 ATL3Q6DD88 541 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 TMEM25Q86YD3 366 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 LSM14BQ9BX40 385 aaKnown RBP19.22■□□□□ 0.67
GTF3A-204ENST00000438571 CSNK1G1Q9HCP0 422 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 TBC1D14Q9P2M4 693 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 ZDHHC9Q9Y397 364 aa19.22■□□□□ 0.67
GTF3A-204ENST00000438571 USP24Q9UPU5 2620 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 HHLA1C9JL84 531 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 PDXKO00764 312 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 MDM4O15151 490 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CYP26A1O43174 497 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 HOXC11O43248 304 aaPredicted RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 GREM1O60565 184 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 TLR5O60602 858 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 TULP3O75386 442 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 KCNK5O95279 499 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 RPN1P04843 607 aaKnown RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 P2RY2P41231 377 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 DHPSP49366 369 aaPredicted RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 TUBP50607 506 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 GAD2Q05329 585 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 PPP3CAQ08209 521 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 SGSM1Q2NKQ1 1148 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CLEC20AQ6ZU45 233 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 ARMCX6Q7L4S7 300 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 MIB1Q86YT6 1006 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CRYBG2Q8N1P7 616 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CCDC26Q8TAB7 109 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 TMC2Q8TDI7 906 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 TMEM174Q8WUU8 243 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 DDX1Q92499 740 aaKnown RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 ERLEC1Q96DZ1 483 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 MMRN2Q9H8L6 949 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 NMUR1Q9HB89 426 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 MBD1Q9UIS9 605 aaPredicted RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 NUDT5Q9UKK9 219 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 MAPK8IP1Q9UQF2 711 aa19.21■□□□□ 0.67
GTF3A-204ENST00000438571 ATXN2Q99700 1313 aaKnown RBP19.21■□□□□ 0.67
GTF3A-204ENST00000438571 CKAP5Q14008 2032 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 A0A0A0MRY4 1105 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 TCRBV21S2A2A0A5A6 115 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 PCNX2A6NKB5 2137 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 C4orf47A7E2U8 309 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 GIPC1O14908 333 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 PDIA4P13667 645 aaKnown RBP19.2■□□□□ 0.66
GTF3A-204ENST00000438571 GRIA2P42262 883 aa19.2■□□□□ 0.66
GTF3A-204ENST00000438571 WASP42768 502 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms