RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GAD2Q05329 585 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 ZXDCQ2QGD7 858 aaPredicted RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 SV2AQ7L0J3 742 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 OTUD6AQ7L8S5 288 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 TMPRSS6Q8IU80 811 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 SLC34A3Q8N130 599 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 C9orf43Q8TAL5 461 aaPredicted RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 PDCD6IPQ8WUM4 868 aaKnown RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 PRCCQ92733 491 aaPredicted RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 ORAI3Q9BRQ5 295 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 RPF1Q9H9Y2 349 aaKnown RBP11.98□□□□□ -0.49
RTN4-211ENST00000438462 CASS4Q9NQ75 786 aa11.98□□□□□ -0.49
RTN4-211ENST00000438462 A0A1B0GVM2 712 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 HNRNPRO43390 633 aaKnown RBP11.97□□□□□ -0.49
RTN4-211ENST00000438462 LZTS3O60299 673 aaPredicted RBP11.97□□□□□ -0.49
RTN4-211ENST00000438462 WNT1P04628 370 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 ACADMP11310 421 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 KCNE1P15382 129 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 DCAF6Q58WW2 860 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 MANEAQ5SRI9 462 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 BTBD8Q5XKL5 378 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
RTN4-211ENST00000438462 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 HEATR4Q86WZ0 1026 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 NCOA7Q8NI08 942 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 SPPL2BQ8TCT7 592 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 CCDC94Q9BW85 323 aaPredicted RBP11.97□□□□□ -0.49
RTN4-211ENST00000438462 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
RTN4-211ENST00000438462 OSBPL2Q9H1P3 480 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
RTN4-211ENST00000438462 CCDC69A6NI79 296 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 PRRT4C9JH25 899 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 GFRA2O00451 464 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TRIM38O00635 465 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TSPAN3O60637 253 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 NOL4O94818 638 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 CENPBP07199 599 aaPredicted RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 P4HBP07237 508 aaKnown RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 ITGA2BP08514 1039 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TYMPP19971 482 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 SDSP20132 328 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 GRM5P41594 1212 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 MLLT3P42568 568 aaPredicted RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.495e-8■■■□□ 16.6
RTN4-211ENST00000438462 RACK1P63244 317 aaKnown RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 GRAMD4Q6IC98 578 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 C14orf80Q86SX3 495 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 SCFD1Q8WVM8 642 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TRMT2BQ96GJ1 504 aaKnown RBP11.96□□□□□ -0.49
RTN4-211ENST00000438462 TMEM245Q9H330 911 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 PTPRHQ9HD43 1115 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 C6orf50Q9HD87 102 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 CNTN3Q9P232 1028 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 ENTPD2Q9Y5L3 495 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
RTN4-211ENST00000438462 HIP1O00291 1037 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 ACKR2O00590 384 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
RTN4-211ENST00000438462 DGAT1O75907 488 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 BCAT1P54687 386 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
RTN4-211ENST00000438462 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 DHX32Q7L7V1 743 aaKnown RBP11.95□□□□□ -0.5
RTN4-211ENST00000438462 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 ETNPPLQ8TBG4 499 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 C2orf15Q8WU43 125 aaKnown RBP11.95□□□□□ -0.5
RTN4-211ENST00000438462 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 CCDC113Q9H0I3 377 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 ABCG4Q9H172 646 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 SMPD4Q9NXE4 827 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 STON1Q9Y6Q2 735 aa11.95□□□□□ -0.5
RTN4-211ENST00000438462 CKAP5Q14008 2032 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 ZNF106Q9H2Y7 1883 aaKnown RBP11.94□□□□□ -0.5
RTN4-211ENST00000438462 SDC3O75056 442 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 TDP2O95551 362 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 SEMA4FO95754 770 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 LIPCP11150 499 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 RARGP13631 454 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 DRD2P14416 443 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 SLC5A2P31639 672 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 PDE6CP51160 858 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 COPAP53621 1224 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 Q4G0T1 1027 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 MCEMP1Q8IX19 187 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
RTN4-211ENST00000438462 KIAA1958Q8N8K9 716 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 FSIP1Q8NA03 581 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 WDR36Q8NI36 951 aaKnown RBP11.94□□□□□ -0.5
RTN4-211ENST00000438462 SKA1Q96BD8 255 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
RTN4-211ENST00000438462 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms