RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TRIM59Q8IWR1 403 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 PPM1KQ8N3J5 372 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 ZBTB44Q8NCP5 570 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 NELL1Q92832 810 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 KAT5Q92993 513 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 EXOC4Q96A65 974 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 NMUR1Q9HB89 426 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 PNPLA8Q9NP80 782 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 POLR3BQ9NW08 1133 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-207ENST00000436324 NAGPAQ9UK23 515 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 PCDHB4Q9Y5E5 795 aa19.3■□□□□ 0.68
HMGN1-207ENST00000436324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.3■□□□□ 0.68
HMGN1-207ENST00000436324 CHURC1-FNTBB4DL54 471 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 FGFR1OPO95684 399 aaKnown RBP19.29■□□□□ 0.68
HMGN1-207ENST00000436324 RARGP13631 454 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 DRD1P21728 446 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 FNTBP49356 437 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 NRLP54845 237 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 SGO2Q562F6 1265 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 RRAGAQ7L523 313 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 PIGZQ86VD9 579 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 TTC30AQ86WT1 665 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 UBR7Q8N806 425 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 ANKRD52Q8NB46 1076 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 HINFPQ9BQA5 517 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 FAM124BQ9H5Z6 455 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-207ENST00000436324 RWDD2AQ9UIY3 292 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 TSPAN16Q9UKR8 245 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 MYH10P35580 1976 aa19.29■□□□□ 0.68
HMGN1-207ENST00000436324 HELZP42694 1942 aaKnown RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 E2F8A0AVK6 867 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 PMM2O15305 246 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 CALCAP01258 141 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 AFPP02771 609 aaKnown RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 CCDC192P0DO97 292 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 ATP5C1P36542 298 aaKnown RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 OPRD1P41143 372 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 SLC8A3P57103 927 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 GAB4Q2WGN9 574 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 C10orf120Q5SQS8 335 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 TMEM270Q6UE05 265 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 SCD5Q86SK9 330 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 ARHGEF19Q8IW93 802 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 BBS7Q8IWZ6 715 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 EHBP1Q8NDI1 1231 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 LMO3Q8TAP4 145 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 UBA3Q8TBC4 463 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 EZH1Q92800 747 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 KLF16Q9BXK1 252 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 FAM126AQ9BYI3 521 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-207ENST00000436324 TBC1D14Q9P2M4 693 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 HESX1Q9UBX0 185 aa19.28■□□□□ 0.68
HMGN1-207ENST00000436324 K7ESF4 209 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 TULP2O00295 520 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 P4HA2O15460 535 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 LILRB5O75023 590 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 VDRP11473 427 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 SLC6A11P48066 632 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 PDE4CQ08493 712 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 LY6G5CQ5SRR4 150 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 CCDC186Q7Z3E2 898 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 KIAA1958Q8N8K9 716 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 SUMF1Q8NBK3 374 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 MED15Q96RN5 788 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 INTS2Q9H0H0 1204 aaKnown RBP19.27■□□□□ 0.68
HMGN1-207ENST00000436324 CYLDQ9NQC7 956 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.27■□□□□ 0.68
HMGN1-207ENST00000436324 USP3Q9Y6I4 520 aa19.27■□□□□ 0.68
HMGN1-207ENST00000436324 RNF225M0QZC1 329 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-207ENST00000436324 ADH1CP00326 375 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 RALAP11233 206 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 ADH5P11766 374 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 PXNP49023 591 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-207ENST00000436324 TKTL1P51854 596 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 SEC13P55735 322 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 MARSP56192 900 aaKnown RBP19.26■□□□□ 0.67
HMGN1-207ENST00000436324 RPLP0P6Q8NHW5 317 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 NDRG1Q92597 394 aaKnown RBP19.26■□□□□ 0.67
HMGN1-207ENST00000436324 CNOT6LQ96LI5 555 aaKnown RBP19.26■□□□□ 0.67
HMGN1-207ENST00000436324 UBXN6Q9BZV1 441 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 DNMT3LQ9UJW3 386 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 SLC8A2Q9UPR5 921 aa19.26■□□□□ 0.67
HMGN1-207ENST00000436324 ANTXRLA6NF34 631 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 ATG13O75143 517 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-207ENST00000436324 BCAT1P54687 386 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 BST2Q10589 180 aaKnown RBP19.25■□□□□ 0.67
HMGN1-207ENST00000436324 SRSF5Q13243 272 aaKnown RBP19.25■□□□□ 0.67
HMGN1-207ENST00000436324 LPAL2Q16609 132 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 TPD52L1Q16890 204 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-207ENST00000436324 FBXO43Q4G163 708 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 C12orf40Q86WS4 652 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 MIB1Q86YT6 1006 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 DCLK2Q8N568 766 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 NAT16Q8N8M0 369 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 MLKLQ8NB16 471 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 CRACR2AQ9BSW2 395 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms