RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ZSCAN16Q9H4T2 348 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 CPNE5Q9HCH3 593 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 ARHGEF4Q9NR80 690 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-214ENST00000435747 ITPR2Q14571 2701 aa11.15□□□□□ -0.62
CPNE1-214ENST00000435747 HOXB2P14652 356 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 GRIA2P42262 883 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 TNFRSF4P43489 277 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 CASP5P51878 434 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 CLDN6P56747 220 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
CPNE1-214ENST00000435747 KDSRQ06136 332 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 MESP2Q0VG99 397 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPNE1-214ENST00000435747 E2F4Q16254 413 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 KYAT1Q16773 422 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 TBC1D25Q3MII6 688 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 C4orf17Q53FE4 359 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 ERICH1Q86X53 443 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
CPNE1-214ENST00000435747 DNASE2BQ8WZ79 361 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 NAF1Q96HR8 494 aaKnown RBP11.14□□□□□ -0.63
CPNE1-214ENST00000435747 TSPAN18Q96SJ8 248 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 CYP2S1Q96SQ9 504 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 GMIPQ9P107 970 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 FTSJ1Q9UET6 329 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 UBQLN1Q9UMX0 589 aaKnown RBP11.14□□□□□ -0.63
CPNE1-214ENST00000435747 PAXBP1Q9Y5B6 917 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 BSNQ9UPA5 3926 aa11.14□□□□□ -0.63
CPNE1-214ENST00000435747 CENPEQ02224 2701 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ICE1Q9Y2F5 2266 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ANO9A1A5B4 782 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 PIRO00625 290 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 TBCAO75347 108 aaKnown RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CYP17A1P05093 508 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 NFICP08651 508 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CSH1P0DML2 217 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CSH2P0DML3 217 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 HAPLN1P10915 354 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 NDUFV2P19404 249 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ABCD1P33897 745 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 EIF2DP41214 584 aaKnown RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 WNT7BP56706 349 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 BNC1Q01954 994 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 NFATC3Q12968 1075 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 INAVAQ3KP66 663 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 JADE1Q6IE81 842 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 DYMQ7RTS9 669 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CD302Q8IX05 232 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ZNF513Q8N8E2 541 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 SPPL2BQ8TCT7 592 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 C2orf15Q8WU43 125 aaKnown RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 HVCN1Q96D96 273 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 BICD1Q96G01 975 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 SLC22A12Q96S37 553 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 MSTO1Q9BUK6 570 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 ABI2Q9NYB9 513 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CCDC39Q9UFE4 941 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 PCDHGA1Q9Y5H4 931 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-214ENST00000435747 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
CPNE1-214ENST00000435747 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-214ENST00000435747 TERTO14746 1132 aaKnown RBP11.12□□□□□ -0.63
CPNE1-214ENST00000435747 PPP6R2O75170 966 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 KRT18P05783 430 aaKnown RBP11.12□□□□□ -0.63
CPNE1-214ENST00000435747 CDK4P11802 303 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ODC1P11926 461 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 TCF3P15923 654 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 WASP42768 502 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 CCR10P46092 362 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ACOT2P49753 483 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 LILRA4P59901 499 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 KCNB1Q14721 858 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 DHCR24Q15392 516 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 HES3Q5TGS1 186 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 RRAGBQ5VZM2 374 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ARL14EPQ8N8R7 260 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-214ENST00000435747 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 RASSF8Q8NHQ8 419 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 CXorf38Q8TB03 319 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ZCWPW1Q9H0M4 648 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 ASB7Q9H672 318 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms