RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 SMARCD1Q96GM5 515 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 LOXL4Q96JB6 756 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 EDEM2Q9BV94 578 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 DMAP1Q9NPF5 467 aaPredicted RBP15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 OSER1Q9NX31 292 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 EHD2Q9NZN4 543 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 EBF1Q9UH73 591 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 CFAP45Q9UL16 551 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 MMP17Q9ULZ9 603 aa15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 ATXN2Q99700 1313 aaKnown RBP15.1■□□□□ 0.01
SMARCE1-205ENST00000431889 ADAMTS9Q9P2N4 1935 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 ASPMQ8IZT6 3477 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 CYP26A1O43174 497 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 ADAM23O75077 832 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 RHOBTB1O94844 696 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 RTN3O95197 1032 aaPredicted RBP15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 KIF20AO95235 890 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 HLA-DRAP01903 254 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 RPN1P04843 607 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 APODP05090 189 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 ASPAP45381 313 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 NDUFA8P51970 172 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 USP39Q53GS9 565 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 PSAPL1Q6NUJ1 521 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 TMEFF1Q8IYR6 380 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 APOBEC3GQ9HC16 384 aaKnown RBP15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 VPS45Q9NRW7 570 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 ZDHHC9Q9Y397 364 aa15.09■□□□□ 0.01
SMARCE1-205ENST00000431889 BCLAF3A2AJT9 711 aaKnown RBP15.08■□□□□ 0
SMARCE1-205ENST00000431889 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 TM4SF5O14894 197 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 ADH1CP00326 375 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
SMARCE1-205ENST00000431889 PPP3CCP48454 512 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 CLDN10P78369 228 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 ZACNQ401N2 412 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 ZNF394Q53GI3 561 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 TPGS1Q6ZTW0 290 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 MIB1Q86YT6 1006 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 SMYD4Q8IYR2 804 aaPredicted RBP15.08■□□□□ 0
SMARCE1-205ENST00000431889 PIGKQ92643 395 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 TNIP3Q96KP6 325 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 CEP295NLQ96MC4 621 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 VRTNQ9H8Y1 702 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 NMUR1Q9HB89 426 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 GDPD2Q9HCC8 539 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
SMARCE1-205ENST00000431889 ATP8B3O60423 1300 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 CFAP47Q6ZTR5 3102 aa15.08■□□□□ 0
SMARCE1-205ENST00000431889 TCRBV21S2A2A0A5A6 115 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 LNP1A1A4G5 178 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 SLC9A3R1O14745 358 aaPredicted RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 TLR5O60602 858 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 TULP3O75386 442 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 AKAP3O75969 853 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PTGER3P43115 390 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 KIR2DL1P43626 348 aaPredicted RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 PPP3CAQ08209 521 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 SGSM1Q2NKQ1 1148 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PMS2CLQ68D20 193 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 TOGARAM2Q6ZUX3 1019 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 RASSF3Q86WH2 238 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PHTF2Q8N3S3 785 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PDZD8Q8NEN9 1154 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 GOLGA5Q8TBA6 731 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 TAS1R2Q8TE23 839 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 SPATA32Q96LK8 384 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 ACOX2Q99424 681 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 SLC6A17Q9H1V8 727 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 GOLPH3LQ9H4A5 285 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 MBD1Q9UIS9 605 aaPredicted RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 HCN2Q9UL51 889 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 CEP192Q8TEP8 1941 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 CNOT1A5YKK6 2376 aaKnown RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 TPRP12270 2363 aaKnown RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 A0A1W2PQH9 124 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 E2F8A0AVK6 867 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 NEDD8-MDP1E9PL57 170 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 FAM163BP0C2L3 166 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PFKLP17858 780 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 SPINK2P20155 84 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 ACO1P21399 889 aaKnown RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 VAMP7P51809 220 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 IRX4P78413 519 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 MRPS21P82921 87 aaKnown RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 GAD2Q05329 585 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 UAP1L1Q3KQV9 507 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 CYP2U1Q7Z449 544 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 P2RY11Q96G91 374 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 CNOT6LQ96LI5 555 aaKnown RBP15.07■□□□□ 0
SMARCE1-205ENST00000431889 CD93Q9NPY3 652 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 TMEM74BQ9NUR3 256 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PLK2Q9NYY3 685 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 HPSEQ9Y251 543 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 FRMD4BQ9Y2L6 1034 aa15.07■□□□□ 0
SMARCE1-205ENST00000431889 PCDHGA5Q9Y5G8 931 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms