RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 SH3BP5O60239 455 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 CACNA2D1P54289 1103 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 RRAGBQ5VZM2 374 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 CCNI2Q6ZMN8 369 aaPredicted RBP23.48■■□□□ 1.35
PTPRA-207ENST00000431048 WDR49Q8IV35 697 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 NAT16Q8N8M0 369 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 TMX3Q96JJ7 454 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 CEP192Q8TEP8 1941 aa23.48■■□□□ 1.35
PTPRA-207ENST00000431048 TUBP50607 506 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 SOWAHCQ53LP3 525 aaPredicted RBP23.47■■□□□ 1.35
PTPRA-207ENST00000431048 C10orf76Q5T2E6 689 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 HECTD3Q5T447 861 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 TRAPPC11Q7Z392 1133 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 TRIML1Q8N9V2 468 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 OR2I1PQ8NGU4 316 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 NOC3LQ8WTT2 800 aaKnown RBP23.47■■□□□ 1.35
PTPRA-207ENST00000431048 FGFBP2Q9BYJ0 223 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 KIAA1586Q9HCI6 787 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 IL37Q9NZH6 218 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 SUSD2Q9UGT4 822 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 SH3BP1Q9Y3L3 701 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 PCDHB9Q9Y5E1 797 aa23.47■■□□□ 1.35
PTPRA-207ENST00000431048 LARP1BQ659C4 914 aaKnown RBP23.46■■□□□ 1.35
PTPRA-207ENST00000431048 SDE2Q6IQ49 451 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 IGSF10Q6WRI0 2623 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 PDZD3Q86UT5 571 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 TMEM25Q86YD3 366 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 MIB1Q86YT6 1006 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 BBS7Q8IWZ6 715 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 OR6B3Q8NGW1 331 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 IPO4Q8TEX9 1081 aaKnown RBP23.46■■□□□ 1.35
PTPRA-207ENST00000431048 FBXO32Q969P5 355 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 HSPA12BQ96MM6 686 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 CAMK1GQ96NX5 476 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 GABRG3Q99928 467 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 B3GNT5Q9BYG0 378 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 ZDHHC5Q9C0B5 715 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 ZNF518BQ9C0D4 1074 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 COMMD8Q9NX08 183 aa23.46■■□□□ 1.35
PTPRA-207ENST00000431048 PRPF6O94906 941 aaKnown RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 CST3P01034 146 aaPredicted RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 FTH1P19P0C7X4 201 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 IDEP14735 1019 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 NDUFV2P19404 249 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 RABEP1Q15276 862 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 PLEKHG6Q3KR16 790 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 SYCP2LQ5T4T6 812 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 C19orf48Q6RUI8 117 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 GLRX5Q86SX6 157 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 CBWD2Q8IUF1 395 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 FOXJ1Q92949 421 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 CCDC86Q9H6F5 360 aaKnown RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 PANK4Q9NVE7 773 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 PPP4R2Q9NY27 417 aa23.45■■□□□ 1.34
PTPRA-207ENST00000431048 CHORDC1Q9UHD1 332 aaPredicted RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 SRPRBQ9Y5M8 271 aaKnown RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 SMG1Q96Q15 3661 aaKnown RBP23.45■■□□□ 1.34
PTPRA-207ENST00000431048 ZDHHC11BP0C7U3 371 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 GNSP15586 552 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 WASP42768 502 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 ANO4Q32M45 955 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 EGFLAMQ63HQ2 1017 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 GRAMD4Q6IC98 578 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 NAXDQ8IW45 347 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 KIAA1522Q9P206 1035 aaPredicted RBP23.44■■□□□ 1.34
PTPRA-207ENST00000431048 CYP8B1Q9UNU6 501 aa23.44■■□□□ 1.34
PTPRA-207ENST00000431048 APOBEC2Q9Y235 224 aaKnown RBP23.44■■□□□ 1.34
PTPRA-207ENST00000431048 FAM92AA1XBS5 289 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 GFRA2O00451 464 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 TRIM24O15164 1050 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 STAU1O95793 577 aaKnown RBP23.43■■□□□ 1.34
PTPRA-207ENST00000431048 IFRD2Q12894 506 aaPredicted RBP23.43■■□□□ 1.34
PTPRA-207ENST00000431048 WDR45BQ5MNZ6 344 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 HTR3DQ70Z44 454 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 METTL3Q86U44 580 aaKnown RBP23.43■■□□□ 1.34
PTPRA-207ENST00000431048 RGL4Q8IZJ4 473 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 B3GALNT2Q8NCR0 500 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 ACOX2Q99424 681 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 DPEP3Q9H4B8 488 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 FBXO2Q9UK22 296 aaPredicted RBP23.43■■□□□ 1.34
PTPRA-207ENST00000431048 SMC3Q9UQE7 1217 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 NFE2L3Q9Y4A8 694 aa23.43■■□□□ 1.34
PTPRA-207ENST00000431048 LOC400499M0QZD8 3231 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 CLDN5O00501 218 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 CBFA2T3O75081 653 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 NDUFS2O75306 463 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 TXLNAP40222 546 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 COL28A1Q2UY09 1125 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 WDR72Q3MJ13 1102 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 CCDC73Q6ZRK6 1079 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 STXBP4Q6ZWJ1 553 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 CHPFQ8IZ52 775 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 DNASE2BQ8WZ79 361 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 WBP2Q969T9 261 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 XPO6Q96QU8 1125 aaKnown RBP23.42■■□□□ 1.34
PTPRA-207ENST00000431048 CCSER2Q9H7U1 834 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 HSPBP1Q9NZL4 362 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 MARK1Q9P0L2 795 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 WDR35Q9P2L0 1181 aa23.42■■□□□ 1.34
PTPRA-207ENST00000431048 GCN1Q92616 2671 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms