RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ADGRF1Q5T601 910 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 USPL1Q5W0Q7 1092 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ALS2CLQ60I27 953 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 JMJD6Q6NYC1 403 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TREML1Q86YW5 311 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CACNA2D3Q8IZS8 1091 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 BBS5Q8N3I7 341 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TRPC4APQ8TEL6 797 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CENPIQ92674 756 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 RRNAD1Q96FB5 475 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC43Q96MW1 224 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SPATA13Q96N96 652 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SSX3Q99909 188 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TCF25Q9BQ70 676 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TRMT13Q9NUP7 481 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 GRHPRQ9UBQ7 328 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TRMT6Q9UJA5 497 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF112Q9UJU3 913 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ADAMTS8Q9UP79 889 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ERVK-11Q9UQG0 969 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PCDHB2Q9Y5E7 798 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 NR2E3Q9Y5X4 410 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ANKRD36BQ8N2N9 1353 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ESYT2A0FGR8 921 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRPC5OSA6NMA1 111 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 H3BQV1 296 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 AP1G1O43747 822 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 USP12O75317 370 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TOMM70O94826 608 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 APOA1P02647 267 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CYP11A1P05108 521 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 OCM2P0CE71 109 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 OCMP0CE72 109 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ANPEPP15144 967 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 AHCYP23526 432 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CRABP2P29373 138 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 BMI1P35226 326 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 GSSP48637 474 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SLC26A2P50443 739 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SCNN1GP51170 649 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 NUP107P57740 925 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 XIAPP98170 497 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 NR1H3Q13133 447 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MEA1Q16626 185 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SMTNL2Q2TAL5 461 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ATG16L1Q676U5 607 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TLDC1Q6P9B6 456 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 COPS6Q7L5N1 327 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MTDHQ86UE4 582 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 COMTD1Q86VU5 262 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 PLCZ1Q86YW0 608 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 C11orf65Q8NCR3 313 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF473Q8WTR7 871 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ING5Q8WYH8 240 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 USP7Q93009 1102 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SDCCAG3Q96C92 435 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MCRS1Q96EZ8 462 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 LINGO1Q96FE5 620 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 C5orf34Q96MH7 638 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TUBGCP5Q96RT8 1024 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SORBS1Q9BX66 1292 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MCCC2Q9HCC0 563 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 IL1RAPL2Q9NP60 686 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 PTCH2Q9Y6C5 1203 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 COMMD3-BMI1R4GMX3 469 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MEI4A8MW99 385 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TNFRSF21O75509 655 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 AKR7A3O95154 331 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 KCNK5O95279 499 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM16O95361 564 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MOCS3O95396 460 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ALBP02768 609 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TP53P04637 393 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ITGB3P05106 788 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 NR3C2P08235 984 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CD63P08962 238 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 FDPSP14324 419 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SYT1P21579 422 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SERPINB1P30740 379 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MAPK4P31152 587 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 RCVRNP35243 200 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ARSDP51689 593 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 HK2P52789 917 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TCEA2Q15560 299 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TEAD4Q15561 434 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC137Q6PK04 289 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRPM8Q7Z2W7 1104 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CDKL3Q8IVW4 592 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 FUKQ8N0W3 1084 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CNTROBQ8N137 903 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MPP5Q8N3R9 675 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ZSWIM2Q8NEG5 633 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRPV3Q8NET8 790 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 BPIFCQ8NFQ6 507 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 PTCD2Q8WV60 388 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC74AQ96AQ1 378 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MTERF3Q96E29 417 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TMEM120AQ9BXJ8 343 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms