RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 NMUR1Q9HB89 426 aa20.68■□□□□ 0.9
PPP1CB-206ENST00000427786 CTNND2Q9UQB3 1225 aa20.68■□□□□ 0.9
PPP1CB-206ENST00000427786 USP3Q9Y6I4 520 aa20.68■□□□□ 0.9
PPP1CB-206ENST00000427786 EML5Q05BV3 1969 aa20.68■□□□□ 0.9
PPP1CB-206ENST00000427786 PTPRZ1P23471 2315 aaPredicted RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 E2F8A0AVK6 867 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 SCAMP3O14828 347 aaKnown RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 GREM1O60565 184 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 TLR5O60602 858 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 RNF40O75150 1001 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 CHRM1P11229 460 aaPredicted RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 MARSP56192 900 aaKnown RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 FBXO43Q4G163 708 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 LMO3Q8TAP4 145 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 JAKMIP2Q96AA8 810 aa20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 TLR8Q9NR97 1041 aaKnown RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 SMG5Q9UPR3 1016 aaKnown RBP20.67■□□□□ 0.9
PPP1CB-206ENST00000427786 ATG2BQ96BY7 2078 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 MYOFQ9NZM1 2061 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 BICDL2A1A5D9 508 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 SLC9A3R1O14745 358 aaPredicted RBP20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 ACO1P21399 889 aaKnown RBP20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 NR1H3Q13133 447 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 DHCR24Q15392 516 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 CCDC186Q7Z3E2 898 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 TTC30AQ86WT1 665 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 TRIM59Q8IWR1 403 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 TRIML1Q8N9V2 468 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 RUBCNQ92622 972 aa20.66■□□□□ 0.9
PPP1CB-206ENST00000427786 FNTBP49356 437 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 PAK1Q13153 545 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 RAB41Q5JT25 222 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 RHBDF2Q6PJF5 856 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 C12orf40Q86WS4 652 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 EXOC4Q96A65 974 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 OTUB2Q96DC9 234 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 HEXIM2Q96MH2 286 aaKnown RBP20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 KLF16Q9BXK1 252 aaPredicted RBP20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 DNAI2Q9GZS0 605 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 KIAA1468Q9P260 1216 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 TBC1D14Q9P2M4 693 aa20.65■□□□□ 0.9
PPP1CB-206ENST00000427786 A0A1W2PQH9 124 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 TBX18O95935 607 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 EIF2DP41214 584 aaKnown RBP20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 STX17P56962 302 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 MESP2Q0VG99 397 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 CCDC40Q4G0X9 1142 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 KLHDC10Q6PID8 442 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 WDR5BQ86VZ2 330 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 LONP2Q86WA8 852 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 BBS7Q8IWZ6 715 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 ZNF276Q8N554 614 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 MED15Q96RN5 788 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 UBXN6Q9BZV1 441 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 SPTBN4Q9H254 2564 aa20.64■□□□□ 0.89
PPP1CB-206ENST00000427786 K7EQS6 105 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 P4HA2O15460 535 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 TBXAS1P24557 533 aaPredicted RBP20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 BHLHA9Q7RTU4 235 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 PIGZQ86VD9 579 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 ETFBKMTQ8IXQ9 262 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 PHTF2Q8N3S3 785 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 DCLK2Q8N568 766 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 ANKRD52Q8NB46 1076 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 RPLP0P6Q8NHW5 317 aa20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 POLR3BQ9NW08 1133 aaPredicted RBP20.63■□□□□ 0.89
PPP1CB-206ENST00000427786 CCDC163A0A0D9SF12 145 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 ANTXRLA6NF34 631 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 HOXC11O43248 304 aaPredicted RBP20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 HRO43593 1189 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 ATG13O75143 517 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 ADH1CP00326 375 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 ADH5P11766 374 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 YWHAEP62258 255 aaKnown RBP20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 LRMPQ12912 555 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 GOLGA7BQ2TAP0 167 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 LY6G5CQ5SRR4 150 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 HTR3DQ70Z44 454 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 KAT5Q92993 513 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 CLIC5Q9NZA1 410 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 TSPAN16Q9UKR8 245 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 SH3BP1Q9Y3L3 701 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 DNAH14Q0VDD8 3507 aa20.62■□□□□ 0.89
PPP1CB-206ENST00000427786 TULP2O00295 520 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 O00370 1275 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 GNA14O95837 355 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 RARGP13631 454 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 CNR2P34972 360 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 ATP5C1P36542 298 aaKnown RBP20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 PSEN1P49768 467 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 BCAT1P54687 386 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 SRSF5Q13243 272 aaKnown RBP20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 CAMK4Q16566 473 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 PKDCCQ504Y2 493 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 SYT13Q7L8C5 426 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 SFTPA1Q8IWL2 248 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 USP33Q8TEY7 942 aa20.61■□□□□ 0.89
PPP1CB-206ENST00000427786 NT5C1BQ96P26 610 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms