RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ELMO3Q96BJ8 720 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 CASS4Q9NQ75 786 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 PCMTD2Q9NV79 361 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 HES2Q9Y543 173 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 TGM2P21980 687 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 AARS2Q5JTZ9 985 aaKnown RBP14.37□□□□□ -0.11
RPL28-202ENST00000426763 MRNIPQ6NTE8 343 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 CHRM3P20309 590 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
RPL28-202ENST00000426763 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 CIPCQ9C0C6 399 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 PLA2G4CQ9UP65 541 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 RHOBTB1O94844 696 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 GYS2P54840 703 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 WSCD1Q658N2 575 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
RPL28-202ENST00000426763 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
RPL28-202ENST00000426763 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 HELQQ8TDG4 1101 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 TNFRSF25Q93038 417 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 SMYD3Q9H7B4 428 aa14.37□□□□□ -0.11
RPL28-202ENST00000426763 AVENQ9NQS1 362 aaPredicted RBP14.37□□□□□ -0.11
RPL28-202ENST00000426763 GYG2O15488 501 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 GRM5P41594 1212 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 DLG4P78352 724 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 UGT3A1Q6NUS8 523 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 LACRTQ9GZZ8 138 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 TOPAZ1Q8N9V7 1692 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CACNA1FO60840 1977 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 ATRNL1Q5VV63 1379 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CBX4O00257 560 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CCDC22O60826 627 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 MAPRE2Q15555 327 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 PABPC1LQ4VXU2 614 aaKnown RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 RETSATQ6NUM9 610 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 SCUBE3Q8IX30 993 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 DEFB106AQ8N104 65 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 GLIS3Q8NEA6 775 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 LRRC37BQ96QE4 947 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CD274Q9NZQ7 290 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 LZTS3O60299 673 aaPredicted RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 CAPRIN1Q14444 709 aaKnown RBP14.36□□□□□ -0.11
RPL28-202ENST00000426763 FIBCD1Q8N539 461 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 ADAM33Q9BZ11 813 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 WWP1Q9H0M0 922 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 MYL2P10916 166 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 ICAM3P32942 547 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 ARL4DP49703 201 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 PTK2BQ14289 1009 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CCNG2Q16589 344 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 TTLL9Q3SXZ7 439 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 COBLL1Q53SF7 1204 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 ADCK2Q7Z695 626 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 POPDC2Q9HBU9 364 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 CDH9Q9ULB4 789 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 PCDHGB4Q9UN71 923 aa14.36□□□□□ -0.11
RPL28-202ENST00000426763 OPHN1O60890 802 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 JCHAINP01591 159 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 MTM1Q13496 603 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ACAP1Q15027 740 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 NFIL3Q16649 462 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SUPT3HB4E1H0 165 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SYNCRIPO60506 623 aaKnown RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 SUPT3HO75486 399 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 LTFP02788 710 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 PRMT2P55345 433 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
RPL28-202ENST00000426763 NAT9Q9BTE0 207 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 KDM4CQ9H3R0 1056 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ALG13Q9NP73 1137 aaKnown RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 RPS6KL1Q9Y6S9 549 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SDR42E2A6NKP2 422 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 RAMP2O60895 175 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 RENBPP51606 427 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 GRIK3Q13003 919 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 C4orf33Q8N1A6 199 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 NOA1Q8NC60 698 aaKnown RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 AGR3Q8TD06 166 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SGSM3Q96HU1 749 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SMPD4Q9NXE4 827 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ANGPTL2Q9UKU9 493 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 CCNE2O96020 404 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 MTFR1Q15390 333 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 BMT2Q1RMZ1 405 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms