RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SH3TC2Q8TF17 1288 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 WRNIP1Q96S55 665 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PPP1R16BQ96T49 567 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ACO2Q99798 780 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ASNSD1Q9NWL6 643 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 LRCH1Q9Y2L9 728 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TEX264Q9Y6I9 313 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 B4GALT5O43286 388 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PRPSAP2O60256 369 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ATG7O95352 703 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TGDSO95455 350 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TOP3BO95985 862 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 GNAT1P11488 350 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 RBL1P28749 1068 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 RGS7P49802 495 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TNFAIP1Q13829 316 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 LGSNQ5TDP6 509 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CHSY1Q86X52 802 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TRIM50Q86XT4 487 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ZBTB8OSQ8IWT0 167 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 NDUFAF2Q8N183 169 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 RBM15BQ8NDT2 890 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 RXFP2Q8WXD0 754 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PEBP4Q96S96 227 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 FRMD8P1Q9BZ68 369 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 XYLT2Q9H1B5 865 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 SMYD3Q9H7B4 428 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 COL11A2P13942 1736 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 SPECC1L-ADORA2AF8WAN1 911 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PLSCR1O15162 318 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 DNAJC6O75061 913 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CIB2O75838 187 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 MICAL2O94851 1124 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ZBED1O96006 694 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CXCL8P10145 99 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 KCNA3P22001 575 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CDH5P33151 784 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 POLE2P56282 527 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 BCAR1P56945 870 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 SATB1Q01826 763 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 LAMTOR4Q0VGL1 99 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 KRT72Q14CN4 511 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PPP6R3Q5H9R7 873 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 C6orf163Q5TEZ5 329 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 WDR78Q5VTH9 848 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PCYT2Q99447 389 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PLLPQ9Y342 182 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ARHGAP42A6NI28 874 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 HOXC6P09630 235 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 ZCCHC18P0CG32 403 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 OSBPP22059 807 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CALRP27797 417 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 YWHAZP63104 245 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TFDP2Q14188 446 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 C1orf146Q5VVC0 180 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 ATG16L1Q676U5 607 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 IRGCQ6NXR0 463 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC30A9Q6PML9 568 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 POTEAQ6S8J7 498 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SH2D5Q6ZV89 423 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CRLF3Q8IUI8 442 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 REPS2Q8NFH8 660 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TRAPPC12Q8WVT3 735 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SDCBP2Q9H190 292 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 STX18Q9P2W9 335 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CPSF3Q9UKF6 684 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 HMGCRP04035 888 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 UBA1P22314 1058 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TCF7P36402 384 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 EFNA5P52803 228 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 CACNA2D1P54289 1103 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PTPN11Q06124 597 aaPredicted RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 NOMO1Q15155 1222 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 LRRC36Q1X8D7 754 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 C16orf46Q6P387 395 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TRMT10BQ6PF06 316 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 BRWD3Q6RI45 1802 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 TMPRSS6Q8IU80 811 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 LOXHD1Q8IVV2 1947 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SCUBE1Q8IWY4 988 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 APOL6Q9BWW8 343 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 NIFKQ9BYG3 293 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PHACTR1Q9C0D0 580 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 ELOVL4Q9GZR5 314 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SMYD2Q9NRG4 433 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 PAPOLBQ9NRJ5 636 aaKnown RBP7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 WDR35Q9P2L0 1181 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 C2CD2Q9Y426 696 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 AFG3L2Q9Y4W6 797 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 MEI4A8MW99 385 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SMAPO00193 183 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 SOCS7O14512 581 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM189A1O60320 539 aa7.82□□□□□ -1.16
SMARCC1-202ENST00000425518 ITGB3P05106 788 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms