RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 NAV2Q8IVL1 2488 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 CABIN1Q9Y6J0 2220 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 PTPRJQ12913 1337 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 A0A1W2PQF6 199 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 GFRA2O00451 464 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 ZBTB24O43167 697 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 HOXB2P14652 356 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 YWHAQP27348 245 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 CASP5P51878 434 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 FAM193AP78312 1265 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 KDSRQ06136 332 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 RABEP1Q15276 862 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 TRIP6Q15654 476 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 CCNI2Q6ZMN8 369 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 SLC41A1Q8IVJ1 513 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 NUP93Q8N1F7 819 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 OR5B17Q8NGF7 314 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 ADAM32Q8TC27 787 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 BBC3Q96PG8 261 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 GABRG3Q99928 467 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 GTPBP2Q9BX10 602 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 HCN2Q9UL51 889 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 PTPRBP23467 1997 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 BPTFQ12830 3046 aa16.54■□□□□ 0.24
RPUSD3-204ENST00000424438 URB1O60287 2271 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 GOLGA8IPA6NC78 632 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 GOLGA8JA6NMD2 632 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 COCHO43405 550 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 CACNG3O60359 315 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 PDGFRBP09619 1106 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 PTPN1P18031 435 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 MDH1BQ5I0G3 518 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 HECTD3Q5T447 861 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 RRAGBQ5VZM2 374 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 STXBP4Q6ZWJ1 553 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 SNX25Q9H3E2 840 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 TMEM30AQ9NV96 361 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 MARK1Q9P0L2 795 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 SRPRBQ9Y5M8 271 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 KNL1Q8NG31 2342 aa16.53■□□□□ 0.24
RPUSD3-204ENST00000424438 ATP8B3O60423 1300 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 GNSP15586 552 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 TXLNAP40222 546 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF132P52740 706 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 C10orf76Q5T2E6 689 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 SYCP2LQ5T4T6 812 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 CCDC73Q6ZRK6 1079 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 USP49Q70CQ1 688 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 HTR3DQ70Z44 454 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 DNASE2BQ8WZ79 361 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 FBXO32Q969P5 355 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 FAM84AQ96KN4 292 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 HSPA12BQ96MM6 686 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 MMS19Q96T76 1030 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 SCUBE2Q9NQ36 999 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 APOBEC2Q9Y235 224 aaKnown RBP16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 SH3BP1Q9Y3L3 701 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
RPUSD3-204ENST00000424438 KNTC1P50748 2209 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 ASXL3Q9C0F0 2248 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 MYH10P35580 1976 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 CBFA2T3O75081 653 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 FTH1P19P0C7X4 201 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 NDUFV2P19404 249 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 CACNA2D1P54289 1103 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 WDR45BQ5MNZ6 344 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 NAXDQ8IW45 347 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 BBS7Q8IWZ6 715 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 B3GALNT2Q8NCR0 500 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 FBXO2Q9UK22 296 aaPredicted RBP16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 RAXQ9Y2V3 346 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 PCDHB9Q9Y5E1 797 aa16.51■□□□□ 0.23
RPUSD3-204ENST00000424438 GOLGA4Q13439 2230 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 NPC1O15118 1278 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 SH3BP5O60239 455 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 DKK1O94907 266 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 ABL1P00519 1130 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 ATICP31939 592 aa16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 SNRPFP62306 86 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-204ENST00000424438 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms