RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 PRMT6Q96LA8 375 aaPredicted RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.264e-6■■■■■ 51.3
TOP2B-203ENST00000424225 HSD17B4P51659 736 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 PGGT1BP53609 377 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 YWHAZP63104 245 aaKnown RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 DEUP1Q05D60 604 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 SESTD1Q86VW0 696 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 STMN2Q93045 179 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TEKT1Q969V4 418 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 MTBPQ96DY7 904 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 POPDC2Q9HBU9 364 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 KLRG2A4D1S0 409 aaPredicted RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 TNFSF9P41273 254 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PDK3Q15120 406 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 KYAT3Q6YP21 454 aaKnown RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PNPOQ9NVS9 261 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 ANK1P16157 1881 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 RGS20O76081 388 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 ITGAXP20702 1163 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 KCTD17Q8N5Z5 321 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 CCDC110Q8TBZ0 833 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 FAM110BQ8TC76 370 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF358Q9NW07 568 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 UBIAD1Q9Y5Z9 338 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PENKP01210 267 aaPredicted RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 MT-ND3P03897 115 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PROCP04070 461 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 PTPN7P35236 360 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 FOLH1Q04609 750 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 TEDDM1Q5T9Z0 273 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 ATP11CQ8NB49 1132 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 MAPK15Q8TD08 544 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 C7orf26Q96N11 449 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 TAAR1Q96RJ0 339 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 RIT2Q99578 217 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 NTPCRQ9BSD7 190 aaKnown RBP13.42□□□□□ -0.26
TOP2B-203ENST00000424225 FOXP3Q9BZS1 431 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 TMEM165Q9HC07 324 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 POMPQ9Y244 141 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
TOP2B-203ENST00000424225 HNRNPCL1O60812 293 aaKnown RBP13.41□□□□□ -0.26
TOP2B-203ENST00000424225 IL4RP24394 825 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 KBTBD6Q86V97 674 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 RASSF3Q86WH2 238 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PQLC3Q8N755 202 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PCDHB4Q9Y5E5 795 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 E2F8A0AVK6 867 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 FAM189A1O60320 539 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 ARSAP15289 507 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 AOC1P19801 751 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 MBLAC2Q68D91 279 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PLEKHG4BQ96PX9 1271 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 APOL6Q9BWW8 343 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PLVAPQ9BX97 442 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 CDH22Q9UJ99 828 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 LCTP09848 1927 aa13.41□□□□□ -0.26
TOP2B-203ENST00000424225 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 CCNT2O60583 730 aaKnown RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 KDELR1P24390 212 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 EPHB1P54762 984 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 HPCAP84074 193 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 ITGA7Q13683 1181 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 TICAM1Q8IUC6 712 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 MAN1C1Q9NR34 630 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 PIH1D1Q9NWS0 290 aaKnown RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 INPP5FQ9Y2H2 1132 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 TRIP11Q15643 1979 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 SIN3BO75182 1162 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 RAG1P15918 1043 aa13.4□□□□□ -0.26
TOP2B-203ENST00000424225 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.26
TOP2B-203ENST00000424225 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms