RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 WDR64B1ANS9 1081 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 HNRNPCL1O60812 293 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 BAG2O95816 211 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 DHRS4L1P0CG22 281 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 CYP2B6P20813 491 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 LRRC36Q1X8D7 754 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 NIPA1Q7RTP0 329 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 ARFGAP1Q8N6T3 406 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 TBC1D22BQ9NU19 505 aa14.94□□□□□ -0.02
MSH5-206ENST00000423982 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
MSH5-206ENST00000423982 EXTL3O43909 919 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 DNAJC6O75061 913 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 TOP3BO95985 862 aaKnown RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 CST3P01034 146 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 EDN1P05305 212 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 KLHL38Q2WGJ6 581 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 PRAMEF19Q5SWL8 479 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 RIPOR1Q6ZS17 1223 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 WDTC1Q8N5D0 677 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 EMC1Q8N766 993 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 SHCBP1Q8NEM2 672 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 NPLOC4Q8TAT6 608 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 RSAD2Q8WXG1 361 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 VCPIP1Q96JH7 1222 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 NTPCRQ9BSD7 190 aaKnown RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 THTPAQ9BU02 230 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 PCSK1NQ9UHG2 260 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 AGO2Q9UKV8 859 aaKnown RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 PPM1HQ9ULR3 514 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 TCRBV5S1A1TA0A578 114 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 SPATA31C2B4DYI2 1134 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 RFC1P35251 1148 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 YWHAGP61981 247 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSH5-206ENST00000423982 MCL1Q07820 350 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 PSMD6Q15008 389 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 NPNTQ6UXI9 565 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 SH2D5Q6ZV89 423 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 ARID3BQ8IVW6 561 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 JOSD2Q8TAC2 188 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 TMEM143Q96AN5 459 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 APOPT1Q96IL0 206 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 ACAP3Q96P50 834 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 C20orf27Q9GZN8 174 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 POLR3FQ9H1D9 316 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 ANKEF1Q9NU02 776 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 RBAKQ9NYW8 714 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 SLC9A2Q9UBY0 812 aa14.93□□□□□ -0.02
MSH5-206ENST00000423982 SEPT9Q9UHD8 586 aaPredicted RBP14.93□□□□□ -0.02
MSH5-206ENST00000423982 UGT1A9O60656 530 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 TRPA1O75762 1119 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 RTN3O95197 1032 aaPredicted RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 LYNP07948 512 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 GARTP22102 1010 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 EDNRBP24530 442 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CTGFP29279 349 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 RPS6KA3P51812 740 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CCL14Q16627 93 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 MTHFD1LQ6UB35 978 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 TRIM72Q6ZMU5 477 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.92□□□□□ -0.02
MSH5-206ENST00000423982 UGT1A7Q9HAW7 530 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 UGT1A10Q9HAW8 530 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 UGT1A8Q9HAW9 530 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CNTN3Q9P232 1028 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 WDR81Q562E7 1941 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 MAGEA13PA6NCF6 341 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CXorf49A8MYA2 514 aaPredicted RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 TNPO2O14787 897 aaKnown RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 SORBS2O94875 1100 aaKnown RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 ETS2P15036 469 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 ANPEPP15144 967 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 APLP1P51693 650 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 ALDH18A1P54886 795 aaKnown RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 ACTR2P61160 394 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 BST1Q10588 318 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 BMPR2Q13873 1038 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 ARMC3Q5W041 872 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 C17orf99Q6UX52 265 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 SCARA5Q6ZMJ2 495 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CCDC60Q8IWA6 550 aaPredicted RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CFAP61Q8NHU2 1237 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 TFAP2BQ92481 460 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 CFAP36Q96G28 342 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 SRPK1Q96SB4 655 aaKnown RBP14.92□□□□□ -0.02
MSH5-206ENST00000423982 TIPINQ9BVW5 301 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 SLC13A1Q9BZW2 595 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 SLC7A8Q9UHI5 535 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 STRIP2Q9ULQ0 834 aa14.92□□□□□ -0.02
MSH5-206ENST00000423982 STBD1O95210 358 aa14.91□□□□□ -0.02
MSH5-206ENST00000423982 CLDN10P78369 228 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms