RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PABPC1LQ4VXU2 614 aaKnown RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 FAM102AQ5T9C2 384 aaPredicted RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 PM20D1Q6GTS8 502 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 HFE2Q6ZVN8 426 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 MSLNLQ96KJ4 702 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 SLITRK1Q96PX8 696 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 THAP2Q9H0W7 228 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 IL21Q9HBE4 155 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 EHD2Q9NZN4 543 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 NUP210Q8TEM1 1887 aaPredicted RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 DOCK8Q8NF50 2099 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 A0A1W2PQH9 124 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 GRAP2O75791 330 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 IPO7O95373 1038 aaKnown RBP16.49■□□□□ 0.23
DDX55-203ENST00000421670 GJA1P17302 382 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 SNX16P57768 344 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 SPA17Q15506 151 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 SLC5A9Q2M3M2 681 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 GAREM2Q75VX8 874 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 GPR149Q86SP6 731 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 TMEM150AQ86TG1 271 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 FAM149B1Q96BN6 582 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 TCEAL4Q96EI5 215 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 UBE2ZQ9H832 354 aaPredicted RBP16.49■□□□□ 0.23
DDX55-203ENST00000421670 NMUR1Q9HB89 426 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 METTL5Q9NRN9 209 aaKnown RBP16.49■□□□□ 0.23
DDX55-203ENST00000421670 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 MYO1AQ9UBC5 1043 aa16.49■□□□□ 0.23
DDX55-203ENST00000421670 UXTQ9UBK9 157 aaPredicted RBP16.49■□□□□ 0.23
DDX55-203ENST00000421670 A0A1W2PRU2 124 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 ABL1P00519 1130 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 H2AFZP0C0S5 128 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 KCNA5P22460 613 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 EPHA5P54756 1037 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX55-203ENST00000421670 CYP4F8P98187 520 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 H2AFVQ71UI9 128 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
DDX55-203ENST00000421670 SCD5Q86SK9 330 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 SCML4Q8N228 414 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 ARHGEF26Q96DR7 871 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 MCRS1Q96EZ8 462 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 VCPIP1Q96JH7 1222 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 S1PR5Q9H228 398 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 CNOT8Q9UFF9 292 aaKnown RBP16.48■□□□□ 0.23
DDX55-203ENST00000421670 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
DDX55-203ENST00000421670 ANKRD62A6NC57 917 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 LTFP02788 710 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 F11P03951 625 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 MAGEA1P43355 309 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 GSCP56915 257 aaPredicted RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 ITIH3Q06033 890 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 STXBP5Q5T5C0 1151 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 DNAJC24Q6P3W2 148 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 SLC26A9Q7LBE3 791 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 ZDHHC17Q8IUH5 632 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 SHKBP1Q8TBC3 707 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 CTNNBL1Q8WYA6 563 aaPredicted RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 IRGQQ8WZA9 623 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 EDEM1Q92611 657 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 TLR8Q9NR97 1041 aaKnown RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 TCRBV5S1A1TA0A578 114 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 ZNF840PA6NDX5 716 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 RCCD1A6NED2 376 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 SART1O43290 800 aaKnown RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 ZDHHC11BP0C7U3 371 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 MYBL1P10243 752 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 PRSS36Q5K4E3 855 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 BSPRYQ5W0U4 402 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 MON1AQ86VX9 555 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
DDX55-203ENST00000421670 ING5Q8WYH8 240 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 KHSRPQ92945 711 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX55-203ENST00000421670 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 GCNAQ96QF7 691 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 WDR35Q9P2L0 1181 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 NUDT5Q9UKK9 219 aa16.47■□□□□ 0.23
DDX55-203ENST00000421670 CLUHO75153 1309 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.23
DDX55-203ENST00000421670 A0A0U1RQJ8 604 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 C2orf78A6NCI8 922 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 HSF2BPO75031 334 aa16.46■□□□□ 0.23
DDX55-203ENST00000421670 MOSPD3O75425 235 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms