RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 COQ4Q9Y3A0 265 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 NUP205Q92621 2012 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 LAMA1P25391 3075 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 CCDC163A0A0D9SF12 145 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 E2F8A0AVK6 867 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 CETN3O15182 167 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 TBX18O95935 607 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 FAM200BP0CF97 657 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 BMP6P22004 513 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 NR1H3Q13133 447 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 SIM2Q14190 667 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-206ENST00000420121 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-206ENST00000420121 PRR23BQ6ZRT6 265 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 ABCA7Q8IZY2 2146 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 SLC4A11Q8NBS3 891 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 FBXL13Q8NEE6 735 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 USP33Q8TEY7 942 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 TATDN2Q93075 761 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 NMUR1Q9HB89 426 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 PNPLA8Q9NP80 782 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 RMND1Q9NWS8 449 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 RAB20Q9NX57 234 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
SSBP3-206ENST00000420121 TNRC6BQ9UPQ9 1833 aaKnown RBP11.67□□□□□ -0.54
SSBP3-206ENST00000420121 SLC16A3O15427 465 aaKnown RBP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 CYP26A1O43174 497 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 TLR5O60602 858 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 ATG13O75143 517 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 RETP07949 1114 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 EPB41P11171 864 aaKnown RBP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 HNRNPLP14866 589 aaKnown RBP eCLIP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SLC6A11P48066 632 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 KIF11P52732 1056 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 RAD23BP54727 409 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SPEM2Q0P670 501 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 ZNF394Q53GI3 561 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 LY6G5CQ5SRR4 150 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SCD5Q86SK9 330 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 BBS7Q8IWZ6 715 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 ETFBKMTQ8IXQ9 262 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 CAMKK1Q8N5S9 505 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 UBR7Q8N806 425 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 GAB3Q8WWW8 586 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SMARCE1Q969G3 411 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 KLF16Q9BXK1 252 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-206ENST00000420121 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 CISHQ9NSE2 258 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 MAN1B1Q9UKM7 699 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 USP3Q9Y6I4 520 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 THADAQ6YHU6 1953 aa11.66□□□□□ -0.54
SSBP3-206ENST00000420121 SPTBN2O15020 2390 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 CEP192Q8TEP8 1941 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 A0A0A0MRY4 1105 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 SLC9A3R1O14745 358 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 GADD45BO75293 160 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 ACO1P21399 889 aaKnown RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 EIF2DP41214 584 aaKnown RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 FKBP3Q00688 224 aaKnown RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 LRRC63Q05C16 580 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 DMC1Q14565 340 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 RSPO4Q2I0M5 234 aaPredicted RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 JAKMIP2Q96AA8 810 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 OTUB2Q96DC9 234 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 P2RY11Q96G91 374 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 CCDC34Q96HJ3 373 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 DUSP16Q9BY84 665 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 TLR8Q9NR97 1041 aaKnown RBP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSBP3-206ENST00000420121 TBC1D14Q9P2M4 693 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 GMEB2Q9UKD1 530 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 HCN2Q9UL51 889 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 RAB23Q9ULC3 237 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 SLC8A2Q9UPR5 921 aa11.65□□□□□ -0.54
SSBP3-206ENST00000420121 A0A1W2PQH9 124 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 GOLGA6L4A6NEF3 574 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 MDM4O15151 490 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 HOXC11O43248 304 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 LRP3O75074 770 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 KAT7O95251 611 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 SMC2O95347 1197 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 IRF1P10914 325 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 ADH5P11766 374 aa11.64□□□□□ -0.55
SSBP3-206ENST00000420121 KIR2DL1P43626 348 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-206ENST00000420121 PUM1Q14671 1186 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms