RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 GPR62Q9BZJ7 368 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 UBXN6Q9BZV1 441 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 PLEKHA4Q9H4M7 779 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ZSCAN16Q9H4T2 348 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 BRD9Q9H8M2 597 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 MKNK2Q9HBH9 465 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 DDX56Q9NY93 547 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 USP25Q9UHP3 1055 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 MYH4Q9Y623 1939 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 COL4A2P08572 1712 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 KDM3AQ9Y4C1 1321 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 NID2Q14112 1375 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 WASH4PA8MWX3 477 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TPD52L2O43399 206 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 PRKAB2O43741 272 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 EXTL3O43909 919 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 KIF5CO60282 957 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 B4GALT3O60512 393 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 URODP06132 367 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 C8AP07357 584 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 CD3EP07766 207 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 MYBL2P10244 700 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 HLA-EP13747 358 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 PDE6AP16499 860 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ELF1P32519 619 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 CDKN1CP49918 316 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 AK2P54819 239 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 OXCT1P55809 520 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 NTHL1P78549 312 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 FAM189BP81408 668 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 POU4F1Q01851 419 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 NKPD1Q17RQ9 610 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 CYP27C1Q4G0S4 372 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 CLLU1OSQ5K130 101 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 SYDE2Q5VT97 1194 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ARHGEF16Q5VV41 709 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 RCSD1Q6JBY9 416 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 CNNM4Q6P4Q7 775 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 GRASPQ7Z6J2 395 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 GALNT15Q8N3T1 639 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 FRS2Q8WU20 508 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 PTPRN2Q92932 1015 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 NXPE2Q96DL1 559 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 PLEKHG4BQ96PX9 1271 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TAAR1Q96RJ0 339 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 RMDN3Q96TC7 470 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 VN1R3Q9BXE9 311 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 C22orf23Q9BZE7 217 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 PLA2G2FQ9BZM2 168 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIM7Q9C029 511 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ARMT1Q9H993 441 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ARPP21Q9UBL0 812 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 MBD1Q9UIS9 605 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 SLC8A2Q9UPR5 921 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ATP8A1Q9Y2Q0 1164 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TRAF6Q9Y4K3 522 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 TNPO3Q9Y5L0 923 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 ST14Q9Y5Y6 855 aa5.98□□□□□ -1.45
ECHDC1-206ENST00000417628 WDR81Q562E7 1941 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 PLIN4Q96Q06 1357 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 COL12A1Q99715 3063 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ERICH4A6NGS2 130 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 IPO5O00410 1097 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 DCLK1O15075 740 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TEX28O15482 410 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TLX3O43711 291 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 MBD3O95983 291 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 THBDP07204 575 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 KRT10P13645 584 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 CD59P13987 128 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 IFNGR1P15260 489 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 SOX5P35711 763 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 FLT3P36888 993 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 GATA4P43694 442 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 NAP1L1P55209 391 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 SP2Q02086 613 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 TLE3Q04726 772 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 RNASELQ05823 741 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 DEUP1Q05D60 604 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 EXOSC9Q06265 439 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 NFATC3Q12968 1075 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF460Q14592 562 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 CLEC16AQ2KHT3 1053 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 PLEKHG6Q3KR16 790 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 LONRF3Q496Y0 759 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 MARCH8Q5T0T0 291 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 SLC9C2Q5TAH2 1124 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 USP53Q70EK8 1073 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 MAMDC2Q7Z304 686 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 C11orf74Q86VG3 221 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 DDX42Q86XP3 938 aaKnown RBP eCLIP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 MARCH9Q86YJ5 346 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ANKRD13BQ86YJ7 626 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 HSCBQ8IWL3 235 aa5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF655Q8N720 491 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-206ENST00000417628 RNF169Q8NCN4 708 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms