RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
GABRE-202ENST00000417300 ZCWPW1Q9H0M4 648 aa12.47□□□□□ -0.41
GABRE-202ENST00000417300 CARD9Q9H257 536 aa12.47□□□□□ -0.41
GABRE-202ENST00000417300 CSNK1G1Q9HCP0 422 aa12.47□□□□□ -0.41
GABRE-202ENST00000417300 METTL5Q9NRN9 209 aaKnown RBP12.47□□□□□ -0.41
GABRE-202ENST00000417300 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
GABRE-202ENST00000417300 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 OR6C75A6NL08 312 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 PAPSS1O43252 624 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 SPOPO43791 374 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 AP1G2O75843 785 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 GABBR2O75899 941 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 GJB5O95377 273 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 GJB6O95452 261 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 PDGFBP01127 241 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 LAG3P18627 525 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.419e-13■■□□□ 12.2
GABRE-202ENST00000417300 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 SLC6A3Q01959 620 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 PIGHQ14442 188 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 ARCQ7LC44 396 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 ZNF572Q7Z3I7 529 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 TMEM173Q86WV6 379 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 CREG2Q8IUH2 290 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 ZMIZ2Q8NF64 920 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.41
GABRE-202ENST00000417300 IGSF21Q96ID5 467 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 TMEM209Q96SK2 561 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 SMOQ99835 787 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 PNPLA8Q9NP80 782 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 TMLHEQ9NVH6 421 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.41
GABRE-202ENST00000417300 LOC730098B7Z3J9 87 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 NT5C1B-RDH14C9J2C7 533 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 H7C4K7 107 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 KCNK3O14649 394 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 ZNF185O15231 689 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 TBC1D4O60343 1298 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 BEST1O76090 585 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 CXCR5P32302 372 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 RFC1P35251 1148 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 PBX3P40426 434 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 OGDHQ02218 1023 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 ITIH3Q06033 890 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 DLX2Q07687 328 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 CFAP221Q4G0U5 840 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 CTXN3Q4LDR2 81 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 SLC39A11Q8N1S5 342 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 RASGEF1CQ8N431 466 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
GABRE-202ENST00000417300 RPGRIP1Q96KN7 1286 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 ZNF558Q96NG5 402 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 PSMB7Q99436 277 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 TTPALQ9BTX7 342 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 DMAP1Q9NPF5 467 aaPredicted RBP12.45□□□□□ -0.42
GABRE-202ENST00000417300 ASNSD1Q9NWL6 643 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 PCDHA3Q9Y5H8 950 aa12.45□□□□□ -0.42
GABRE-202ENST00000417300 CTAGE15A4D2H0 777 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 HHLA1C9JL84 531 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 DPYSL4O14531 572 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 CTIFO43310 598 aaKnown RBP12.44□□□□□ -0.42
GABRE-202ENST00000417300 TADA3O75528 432 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 FBXO21O94952 628 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 CTAGE8P0CG41 777 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 PSMA2P25787 234 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 PEX5P50542 639 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 DNA2P51530 1060 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 GPM6BQ13491 265 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 RSPO4Q2I0M5 234 aaPredicted RBP12.44□□□□□ -0.42
GABRE-202ENST00000417300 CTC1Q2NKJ3 1217 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 CTAGE6Q86UF2 777 aa12.44□□□□□ -0.42
GABRE-202ENST00000417300 CEP57Q86XR8 500 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms