RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 FSCN2O14926 492 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 ZBED1O96006 694 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 CPB1P15086 417 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 PGFP49763 221 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 YWHAZP63104 245 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 ACAP1Q15027 740 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 HADHQ16836 314 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 SPOCD1Q6ZMY3 1216 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 RNF19BQ6ZMZ0 732 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 POLNQ7Z5Q5 900 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 DCP1BQ8IZD4 617 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 C1orf54Q8WWF1 131 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 YME1L1Q96TA2 773 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 DDX23Q9BUQ8 820 aaKnown RBP17.76■□□□□ 0.43
CALD1-204ENST00000417172 MAGEB5Q9BZ81 275 aa17.76■□□□□ 0.43
CALD1-204ENST00000417172 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 CCDC188H7C350 402 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 TBC1D4O60343 1298 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 DAB1O75553 588 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 MYBL2P10244 700 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 PCK1P35558 622 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 MATKP42679 507 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 CLCN6P51797 869 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 SLC5A3P53794 718 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 TUBB4BP68371 445 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 KLF1Q13351 362 aaPredicted RBP17.75■□□□□ 0.43
CALD1-204ENST00000417172 TRADDQ15628 312 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 EDEM1Q92611 657 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 PLVAPQ9BX97 442 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.75■□□□□ 0.43
CALD1-204ENST00000417172 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 PRKAG2Q9UGJ0 569 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 SLC27A5Q9Y2P5 690 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 CDY1Q9Y6F8 540 aa17.75■□□□□ 0.43
CALD1-204ENST00000417172 GOLGA6L10A0A0M3HER8 536 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 TTI1O43156 1089 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 HEXIM1O94992 359 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 KRT7P08729 469 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 CDKN2BP42772 138 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PTPN9P43378 593 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 SULT1E1P49888 294 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 FPGSQ05932 587 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 SNX1Q13596 522 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 CA9Q16790 459 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 ZC3H12AQ5D1E8 599 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 RNF168Q8IYW5 571 aaPredicted RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 RCOR2Q8IZ40 523 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 RIN2Q8WYP3 895 aaPredicted RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 DDX56Q9NY93 547 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 RAB21Q9UL25 225 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 hCG_1818297A0A087WSY0 165 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 OR6C75A6NL08 312 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 TNFRSF10BO14763 440 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PRPSAP2O60256 369 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PHF2O75151 1096 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 FBXO21O94952 628 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 SEC31AO94979 1220 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 KCNJ1P48048 391 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 MMRN1Q13201 1228 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 ODF2Q5BJF6 829 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 ARCQ7LC44 396 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 SLC39A11Q8N1S5 342 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 CCDC185Q8N715 623 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 COLGALT1Q8NBJ5 622 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 CENPIQ92674 756 aaPredicted RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 MAGOHBQ96A72 148 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 HAUS1Q96CS2 278 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 ZNF558Q96NG5 402 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 SLC2A13Q96QE2 648 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 SNRNP25Q9BV90 132 aaKnown RBP17.74■□□□□ 0.43
CALD1-204ENST00000417172 POPDC2Q9HBU9 364 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 TMPRSS4Q9NRS4 437 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 STIM2Q9P246 746 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PCDHB5Q9Y5E4 795 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PLXNA3P51805 1871 aa17.74■□□□□ 0.43
CALD1-204ENST00000417172 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 TARSL2A2RTX5 802 aaKnown RBP17.73■□□□□ 0.43
CALD1-204ENST00000417172 MTMR11A4FU01 709 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 EFCAB14O75071 495 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 FGBP02675 491 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 LTFP02788 710 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 KDELR1P24390 212 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 NFE2Q16621 373 aaPredicted RBP17.73■□□□□ 0.43
CALD1-204ENST00000417172 ANKS3Q6ZW76 656 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 CMTR2Q8IYT2 770 aaKnown RBP17.73■□□□□ 0.43
CALD1-204ENST00000417172 KCTD6Q8NC69 237 aa17.73■□□□□ 0.43
CALD1-204ENST00000417172 COL4A4P53420 1690 aaPredicted RBP17.73■□□□□ 0.43
CALD1-204ENST00000417172 CAPN15O75808 1086 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 NCAM1P13591 858 aa17.72■□□□□ 0.43
CALD1-204ENST00000417172 CAPN2P17655 700 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms