RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRIM36Q9NQ86 728 aa4.38□□□□□ -1.71
HMGB3P23-201ENST00000414981 CAPN11Q9UMQ6 739 aa4.38□□□□□ -1.71
HMGB3P23-201ENST00000414981 INSRP06213 1382 aa4.38□□□□□ -1.71
HMGB3P23-201ENST00000414981 FGD6Q6ZV73 1430 aa4.38□□□□□ -1.71
HMGB3P23-201ENST00000414981 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 ABCA5Q8WWZ7 1642 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TISP43B9A030 160 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 PMPCBO75439 489 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 INMTO95050 263 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 NHLRC4P0CG21 123 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TXNP10599 105 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 BTF3P20290 206 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 UQCRC1P31930 480 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 GKP32189 559 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TIRAPP58753 221 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SEMA5AQ13591 1074 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SLC29A2Q14542 456 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 ZNF750Q32MQ0 723 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 L1TD1Q5T7N2 865 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SESTD1Q86VW0 696 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SFTPA1Q8IWL2 248 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SDR16C5Q8N3Y7 309 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TERB1Q8NA31 727 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CYP2W1Q8TAV3 490 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TMEM171Q8WVE6 324 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 IPCEF1Q8WWN9 437 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CTHRC1Q96CG8 243 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 SNX18Q96RF0 628 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 STRBPQ96SI9 672 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 NUP62CLQ9H1M0 184 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CHST8Q9H2A9 424 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 FAM83DQ9H4H8 585 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 TFCP2L1Q9NZI6 479 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 DKK4Q9UBT3 224 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 NRBP1Q9UHY1 535 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 AMFRQ9UKV5 643 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 DRG1Q9Y295 367 aaKnown RBP4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 COMMD10Q9Y6G5 202 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 PRDM2Q13029 1718 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CARMIL1Q5VZK9 1371 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 NCOA1Q15788 1441 aa4.37□□□□□ -1.71
HMGB3P23-201ENST00000414981 CCDC189A1A4V9 331 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 POC1B-GALNT4F8VUJ3 575 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 AP4M1O00189 453 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 ADAMTS3O15072 1205 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 CD3EAPO15446 510 aaKnown RBP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 RGS10O43665 173 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 FGAP02671 866 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 TUBB4AP04350 444 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 RHCEP18577 417 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 PEX2P28328 305 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 PTDSS1P48651 473 aaKnown RBP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 RPS16P62249 146 aaKnown RBP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 TIAL1Q01085 375 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 E2F1Q01094 437 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 RHDQ02161 417 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 BIRC2Q13490 618 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 TMEM119Q4V9L6 283 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 FCRL6Q6DN72 434 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 PPP4R4Q6NUP7 873 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 CATSPERGQ6ZRH7 1159 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 CHSY1Q86X52 802 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 FMNL3Q8IVF7 1028 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 YAF2Q8IY57 180 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 GALNT4Q8N4A0 578 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 DNAJB14Q8TBM8 379 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 SMCR8Q8TEV9 937 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 DDB2Q92466 427 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 ASB2Q96Q27 587 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 PRR25Q96S07 402 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 SENP7Q9BQF6 1050 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 VN1R3Q9BXE9 311 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 STK31Q9BXU1 1019 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 BTBD1Q9H0C5 482 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 TBC1D30Q9Y2I9 924 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 SETD1BQ9UPS6 1966 aaKnown RBP4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 MIA2Q96PC5 1412 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 ZMYM4Q5VZL5 1548 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 KDM5BQ9UGL1 1544 aa4.36□□□□□ -1.71
HMGB3P23-201ENST00000414981 PTPN23Q9H3S7 1636 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 ARHGEF17Q96PE2 2063 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 AQP7P3A6NL99 342 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 H7C4K7 107 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 FOXN3O00409 490 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 PPP6CO00743 305 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 TCERG1O14776 1098 aaKnown RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 RRP9O43818 475 aaKnown RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 EXOC3O60645 756 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 SRGAP2O75044 1071 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 RASAL1O95294 804 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 CHRM5P08912 532 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 PHKG2P15735 406 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 CPT1AP50416 773 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 GATMP50440 423 aa4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 SUMO2P61956 95 aaKnown RBP4.35□□□□□ -1.71
HMGB3P23-201ENST00000414981 SRSF7Q16629 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms