RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 CKMP06732 381 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 RALAP11233 206 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 LCP1P13796 627 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 VIPR2P41587 438 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 DAOAP59103 153 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 ZBED6P86452 979 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 PDCLQ13371 301 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 TRIM14Q14142 442 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 SFMBT2Q5VUG0 894 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 TRIM72Q6ZMU5 477 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 BHLHA9Q7RTU4 235 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 IRF2BP2Q7Z5L9 587 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 MFSD6LQ8IWD5 586 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 KIAA1958Q8N8K9 716 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 SYN2Q92777 582 aaPredicted RBP17.31■□□□□ 0.36
LINC00398-201ENST00000414407 USP13Q92995 863 aaPredicted RBP17.31■□□□□ 0.36
LINC00398-201ENST00000414407 SLC22A12Q96S37 553 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 KXD1Q9BQD3 176 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 RPP25Q9BUL9 199 aaKnown RBP17.31■□□□□ 0.36
LINC00398-201ENST00000414407 RNF38Q9H0F5 515 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 ST7Q9NRC1 585 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00398-201ENST00000414407 CYTH4Q9UIA0 394 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 NAGPAQ9UK23 515 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 CAPN11Q9UMQ6 739 aa17.31■□□□□ 0.36
LINC00398-201ENST00000414407 ANAPC1Q9H1A4 1944 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 HEPACAM2A8MVW5 462 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 COCHO43405 550 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 DCXO43602 365 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 TLR5O60602 858 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 MMEP08473 750 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 ALADP13716 330 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 PSMC3P17980 439 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 PGFP49763 221 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00398-201ENST00000414407 FCHO2Q0JRZ9 810 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 TAF3Q5VWG9 929 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 VITQ6UXI7 678 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00398-201ENST00000414407 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 C1orf131Q8NDD1 294 aaKnown RBP17.3■□□□□ 0.36
LINC00398-201ENST00000414407 SLC20A1Q8WUM9 679 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 PPP1R13BQ96KQ4 1090 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 MIS12Q9H081 205 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 CCSER2Q9H7U1 834 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 SLC2A4RGQ9NR83 387 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 OSER1Q9NX31 292 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 MUTYHQ9UIF7 546 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 DUSP12Q9UNI6 340 aa17.3■□□□□ 0.36
LINC00398-201ENST00000414407 NUP210Q8TEM1 1887 aaPredicted RBP17.3■□□□□ 0.36
LINC00398-201ENST00000414407 E5RJQ4 531 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 PI4K2BG5E9Z4 385 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 CYP1A1P04798 512 aaPredicted RBP17.29■□□□□ 0.36
LINC00398-201ENST00000414407 SRFP11831 508 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 RARGP13631 454 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 CHRNB2P17787 502 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 ATP5C1P36542 298 aaKnown RBP17.29■□□□□ 0.36
LINC00398-201ENST00000414407 PRKCIP41743 596 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 FMO1Q01740 532 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 ARID5AQ03989 594 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 BEND5Q7L4P6 421 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 ZDHHC17Q8IUH5 632 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 SCUBE3Q8IX30 993 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 BPIFB1Q8TDL5 484 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 RSPRY1Q96DX4 576 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 AGPAT1Q99943 283 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 TRMT61BQ9BVS5 477 aaKnown RBP17.29■□□□□ 0.36
LINC00398-201ENST00000414407 PLA2G2FQ9BZM2 168 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 ABCC13Q9NSE7 274 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 THG1LQ9NWX6 298 aaKnown RBP17.29■□□□□ 0.36
LINC00398-201ENST00000414407 LUC7L2Q9Y383 392 aaKnown RBP17.29■□□□□ 0.36
LINC00398-201ENST00000414407 NCOR1O75376 2440 aa17.29■□□□□ 0.36
LINC00398-201ENST00000414407 TTC28Q96AY4 2481 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 E7ENQ6 273 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 PAPSS1O43252 624 aaPredicted RBP17.28■□□□□ 0.36
LINC00398-201ENST00000414407 AP5Z1O43299 807 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 GYPCP04921 128 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 MBL2P11226 248 aaPredicted RBP17.28■□□□□ 0.36
LINC00398-201ENST00000414407 GABRB2P47870 512 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 NOMO3P69849 1222 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 ZXDAP98168 799 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 USP4Q13107 963 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 ASIC2Q16515 512 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 BSPRYQ5W0U4 402 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 BTBD8Q5XKL5 378 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
LINC00398-201ENST00000414407 GOLGA1Q92805 767 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 EDAQ92838 391 aa17.28■□□□□ 0.36
LINC00398-201ENST00000414407 NACA2Q9H009 215 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms