RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 KIF28PB7ZC32 967 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 RPP40O75818 363 aaKnown RBP5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 NDUFA10O95299 355 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 TK1P04183 234 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 ERBB2P04626 1255 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A15PP0C7V4 464 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A14PP0C7W9 464 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 PPP3CBP16298 524 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 KRT9P35527 623 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 VAV2P52735 878 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 TIAL1Q01085 375 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 TRPC3Q13507 836 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 RABL3Q5HYI8 236 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMEM196Q5HYL7 178 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 SYT13Q7L8C5 426 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 KRTAP1-3Q8IUG1 177 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM109AQ8N4B1 249 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 TMEM57Q8N5G2 664 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 B3GALNT2Q8NCR0 500 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 CPT1BQ92523 772 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 SDCCAG3Q96C92 435 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 MCRS1Q96EZ8 462 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 BOD1Q96IK1 185 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 EIF3CQ99613 913 aaKnown RBP5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 VN1R3Q9BXE9 311 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 XYLT2Q9H1B5 865 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 GALNT9Q9HCQ5 603 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 KCND3Q9UK17 655 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 SLC13A4Q9UKG4 626 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 RIMKLBQ9ULI2 386 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 CNTN6Q9UQ52 1028 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 DRG1Q9Y295 367 aaKnown RBP5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 EXOC5O00471 708 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 HOXC11O43248 304 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 CD4P01730 458 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 CENPBP07199 599 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 ATP1A3P13637 1013 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 DRD1P21728 446 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 BDNFP23560 247 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 SERPINA4P29622 427 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 ELF1P32519 619 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 PBX1P40424 430 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 LIFRP42702 1097 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 GSTM5P46439 218 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 RBM5P52756 815 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 SEC24CP53992 1094 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 TIRAPP58753 221 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 MPP1Q00013 466 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 UBE3AQ05086 875 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 SF3A3Q12874 501 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 FOXD4Q12950 439 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 MAPK7Q13164 816 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 EFR3AQ14156 821 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 ICAM4Q14773 271 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 TTC22Q5TAA0 569 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAAH2Q6GMR7 532 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZNF585AQ6P3V2 769 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 SYNE3Q6ZMZ3 975 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 METTL25Q8N6Q8 603 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 CPEB3Q8NE35 698 aaKnown RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 GLG1Q92896 1179 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 HVCN1Q96D96 273 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 NUDT22Q9BRQ3 303 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 TTPALQ9BTX7 342 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 DPCDQ9BVM2 203 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 DEF6Q9H4E7 631 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 GLOD4Q9HC38 313 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 UBN1Q9NPG3 1134 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 NDUFAF4Q9P032 175 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 RRP7AQ9Y3A4 280 aaKnown RBP5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 PCDHB7Q9Y5E2 793 aa5.43□□□□□ -1.54
HMGB3P31-201ENST00000413333 UNC119BA6NIH7 251 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 DBX1A6NMT0 343 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZAR1LA6NP61 321 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 DHHO43323 396 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 CDKL5O76039 1030 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 WDR47O94967 919 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 CD19P15391 556 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 HTR7P34969 479 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZEB1P37275 1124 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 MAGEA10P43363 369 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 HNRNPMP52272 730 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 ADAM17P78536 824 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 TLE2Q04725 743 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 RNASELQ05823 741 aaKnown RBP5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 PDCLQ13371 301 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 BFSP2Q13515 415 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 TRIM60Q495X7 471 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 GALNTL6Q49A17 601 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZNF569Q5MCW4 686 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM180BQ6P0A1 224 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 MSANTD2Q6P1R3 559 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 PCGF5Q86SE9 256 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 TRABD2AQ86V40 505 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 SUPT20HQ8NEM7 779 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 SLC22A17Q8WUG5 538 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 HTRA1Q92743 480 aa5.42□□□□□ -1.54
HMGB3P31-201ENST00000413333 WDR24Q96S15 920 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms