RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RRAGAQ7L523 313 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 OR56A1Q8NGH5 318 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 SCAMP5Q8TAC9 235 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 SPSB4Q96A44 273 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 MED15Q96RN5 788 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 TWNKQ96RR1 684 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 TRIB1Q96RU8 372 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 RBM15Q96T37 977 aaKnown RBP eCLIP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 NEU1Q99519 415 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 ETAA1Q9NY74 926 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 EIF2B4Q9UI10 523 aaKnown RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 ACAD8Q9UKU7 415 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 MTO1Q9Y2Z2 717 aaKnown RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 CCDC195A0A1B0GUA6 201 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 VPS4BO75351 444 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 PTP4A3O75365 173 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 ITGB3P05106 788 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 SCNN1GP51170 649 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 CCR9P51686 369 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 COPAP53621 1224 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 PLIN5Q00G26 463 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 SATB1Q01826 763 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 CRHR2Q13324 411 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 HECTD3Q5T447 861 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 MAP3K21Q5TCX8 1036 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TAPT1Q6NXT6 567 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 FOXR2Q6PJQ5 311 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TTLL10Q6ZVT0 673 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 R3HCC1LQ7Z5L2 792 aaKnown RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 SLC44A2Q8IWA5 706 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 YAF2Q8IY57 180 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 NGEFQ8N5V2 710 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 CEP70Q8NHQ1 597 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 GOLGA1Q92805 767 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 EDAQ92838 391 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TRAPPC9Q96Q05 1148 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 PCDHAC1Q9H158 963 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 MRPS18AQ9NVS2 196 aaKnown RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 ZSCAN32Q9NX65 697 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 ADD3Q9UEY8 706 aaKnown RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 NEU2Q9Y3R4 380 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 SNX5Q9Y5X3 404 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 XDHP47989 1333 aa5.01□□□□□ -1.61
BRCA1-204ENST00000412061 TDRD9Q8NDG6 1382 aaKnown RBP5.01□□□□□ -1.61
BRCA1-204ENST00000412061 A0A087WZ62 844 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 SMTNL1A8MU46 457 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 H0Y3Z8 333 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 H7C0S8 307 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 AP3D1O14617 1153 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TRIM24O15164 1050 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 DNPH1O43598 174 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 RECQL4O94761 1208 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TMEM63AO94886 807 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TK1P04183 234 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 PRKCBP05771 671 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ATXN1LP0C7T5 689 aaKnown RBP5□□□□□ -1.61
BRCA1-204ENST00000412061 NPPBP16860 134 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 FGFR4P22455 802 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 IL1R2P27930 398 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 MAPK4P31152 587 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 BCAT1P54687 386 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 FSTL1Q12841 308 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 CDC16Q13042 620 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 BECN1Q14457 450 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ICAM4Q14773 271 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 IQCB1Q15051 598 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 MAPKAPK3Q16644 382 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 SLC30A6Q6NXT4 461 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 NFRKBQ6P4R8 1299 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 BBS12Q6ZW61 710 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 VSIG1Q86XK7 387 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TMEM57Q8N5G2 664 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 PSD4Q8NDX1 1056 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 OR6Y1Q8NGX8 325 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 SSH3Q8TE77 659 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ZNF384Q8TF68 577 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 RAPGEF4Q8WZA2 1011 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 SDCCAG3Q96C92 435 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 RNF125Q96EQ8 232 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 CDHR1Q96JP9 859 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 SLC46A1Q96NT5 459 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 PPP1R9BQ96SB3 815 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 YME1L1Q96TA2 773 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 RTKNQ9BST9 563 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TXLNGYQ9BZA5 131 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 TTYH3Q9C0H2 523 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ARHGAP39Q9C0H5 1083 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ACAD9Q9H845 621 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 PRDM8Q9NQV8 689 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 RNF181Q9P0P0 153 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 HSFX1Q9UBD0 423 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 MID2Q9UJV3 735 aa5□□□□□ -1.61
BRCA1-204ENST00000412061 ZMYND8Q9ULU4 1186 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms