RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PTDSS2Q9BVG9 487 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 TMEM60Q9H2L4 133 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 SSX2IPQ9Y2D8 614 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 ABCC9O60706 1549 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ARID4BQ4LE39 1312 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 IFITM10A6NMD0 228 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 PRSS47A8MTI9 375 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 NT5C1B-RDH14C9J2C7 533 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 BTBD19C9JJ37 291 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM227AF5H4B4 570 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 SLC16A6O15403 523 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 TPD52L2O43399 206 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 UBXN7O94888 489 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ALDH2P05091 517 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 PRKCBP05771 671 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 NBPF7P0C2Y1 421 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ATXN1LP0C7T5 689 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 FPR3P25089 353 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 PPIFP30405 207 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 AGFG1P52594 562 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 LOXL3P58215 753 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZXDBP98169 803 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 DSC2Q02487 901 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 PICALMQ13492 652 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 E2F2Q14209 437 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 KIF22Q14807 665 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 SAFBQ15424 915 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ASIC2Q16515 512 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 LONRF3Q496Y0 759 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 COBLL1Q53SF7 1204 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 SYCP2LQ5T4T6 812 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 RGS7BPQ6MZT1 257 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 FBXL22Q6P050 247 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 DEF8Q6ZN54 512 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 TTC7BQ86TV6 843 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 KIAA0319LQ8IZA0 1049 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 NSUN6Q8TEA1 469 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 DNASE2BQ8WZ79 361 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 MAP4K1Q92918 833 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 TNPO1Q92973 898 aaKnown RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZFYVE19Q96K21 471 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 LMLNQ96KR4 655 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 CAMK1GQ96NX5 476 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 RPS6KC1Q96S38 1066 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 TMEM204Q9BSN7 226 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 C1orf43Q9BWL3 253 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 CHST12Q9NRB3 414 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 L1RE1Q9UN81 338 aa2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 RSF1Q96T23 1441 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P2-201ENST00000411913 TTC3P53804 2025 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 PLEKHD1A6NEE1 506 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 SERINC4A6NH21 518 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 A6NNZ2 444 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 CCER2I3L3R5 266 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 AP4M1O00189 453 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 TPP1O14773 563 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 IGKV3-20P01619 116 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 MYCLP12524 364 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 HTR1BP28222 390 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 HILS1P60008 231 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 RPS13P62277 151 aaKnown RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM193AP78312 1265 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 OS9Q13438 667 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 BRD3Q15059 726 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 ANO6Q4KMQ2 910 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 C4orf46Q504U0 113 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 RNASE12Q5GAN4 147 aaKnown RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 C9orf50Q5SZB4 431 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 BCDIN3DQ7Z5W3 292 aaKnown RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 PPP1R35Q8TAP8 253 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZNF398Q8TD17 642 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 PSMD1Q99460 953 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 CGRRF1Q99675 332 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 MRPL44Q9H9J2 332 aaKnown RBP2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 HESX1Q9UBX0 185 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 POLHQ9Y253 713 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 STXBP5LQ9Y2K9 1186 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 COMMD10Q9Y6G5 202 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 RB1CC1Q8TDY2 1594 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 TNIKQ9UKE5 1360 aa2.98□□□□□ -1.93
HMGB3P2-201ENST00000411913 A0A088AWK7 358 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CAPN8A6NHC0 703 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 APAF1O14727 1248 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 ARIH2O95376 493 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 FTLP02792 175 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 MYBP10242 640 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 PRDX5P30044 214 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 MAP2K6P52564 334 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 HK3P52790 923 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CACNB3P54284 484 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 LILRA4P59901 499 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 E2F1Q01094 437 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 SEMA5AQ13591 1074 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 IQCB1Q15051 598 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 DEPDC1Q5TB30 811 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 IL31Q6EBC2 164 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 DARS2Q6PI48 645 aaKnown RBP2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 NPNTQ6UXI9 565 aa2.97□□□□□ -1.93
HMGB3P2-201ENST00000411913 CCDC149Q6ZUS6 474 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms