RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC148-203ENST00000409889 TMEM86AQ8N2M4 240 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 ENGASEQ8NFI3 743 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 CADM4Q8NFZ8 388 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 SNIP1Q8TAD8 396 aaKnown RBP11.27□□□□□ -0.61
CCDC148-203ENST00000409889 SPATA17Q96L03 361 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 ARID3AQ99856 593 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 WSB2Q9NYS7 404 aaPredicted RBP11.27□□□□□ -0.61
CCDC148-203ENST00000409889 GMIPQ9P107 970 aa11.27□□□□□ -0.61
CCDC148-203ENST00000409889 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
CCDC148-203ENST00000409889 A0A1B0GVT2 93 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 K7ENM7 598 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 HUS1O60921 280 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 ANXA13P27216 316 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 PNPLA4P41247 253 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 MAGEA11P43364 429 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 CLDN6P56747 220 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 TLE3Q04726 772 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 C4orf50Q6ZRC1 276 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 OSTM1Q86WC4 334 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 NECAB1Q8N987 351 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 OTUB2Q96DC9 234 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 TTLL2Q9BWV7 592 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 EIF2B4Q9UI10 523 aaKnown RBP11.26□□□□□ -0.61
CCDC148-203ENST00000409889 PCDHB6Q9Y5E3 794 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 BOD1L1Q8NFC6 3051 aa11.26□□□□□ -0.61
CCDC148-203ENST00000409889 NPHP3-ACAD11A0A0J9YXS1 232 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 E2F8A0AVK6 867 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 KCNJ18B7U540 433 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 JAK2O60674 1132 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 WISP1O95388 367 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 JUPP14923 745 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 PCSK1P29120 753 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 GRIK1P39086 918 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 PPP3CCP48454 512 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 CSNK1EP49674 416 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 GUCY1B3Q02153 619 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 SRSF1Q07955 248 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 GRAMD4Q6IC98 578 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 ADGRF2Q8IZF7 708 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 C4orf32Q8N8J7 132 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 NSUN7Q8NE18 718 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 KCNN1Q92952 543 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 MYLPFQ96A32 169 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 CEP295NLQ96MC4 621 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 SEMA4CQ9C0C4 833 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 SPHK2Q9NRA0 654 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 DNAJC17Q9NVM6 304 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 EHD2Q9NZN4 543 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 USP36Q9P275 1121 aaKnown RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 MAGEC2Q9UBF1 373 aaPredicted RBP11.25□□□□□ -0.61
CCDC148-203ENST00000409889 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
CCDC148-203ENST00000409889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 METTL12A8MUP2 240 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 B8ZZF3 427 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 TISP43B9A030 160 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 WASH3PC4AMC7 463 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 ATP2C2O75185 946 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 ITGB3P05106 788 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 BDNFP23560 247 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 LHX1P48742 406 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 CCT8P50990 548 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 AFF3P51826 1226 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 RTP5Q14D33 572 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 KIF19Q2TAC6 998 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 INAVAQ3KP66 663 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 ADALQ6DHV7 355 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 FAM171BQ6P995 826 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 METTL3Q86U44 580 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 BBS7Q8IWZ6 715 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 C1orf216Q8TAB5 229 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SNX19Q92543 992 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 FGF11Q92914 225 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 GTF3C6Q969F1 213 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 NRSN2Q9GZP1 204 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 MKRN2Q9H000 416 aaKnown RBP11.24□□□□□ -0.61
CCDC148-203ENST00000409889 KCND2Q9NZV8 630 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 AGAP1Q9UPQ3 857 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SH3BP1Q9Y3L3 701 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SNX11Q9Y5W9 270 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 SLCO1B1Q9Y6L6 691 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
CCDC148-203ENST00000409889 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 NUMA1Q14980 2115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms