RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SCML4Q8N228 414 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 FBXL6Q8N531 539 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 NEK11Q8NG66 645 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SLC35F5Q8WV83 523 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SPAG5Q96R06 1193 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ERGIC2Q96RQ1 377 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SLC22A12Q96S37 553 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CYP2S1Q96SQ9 504 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CBX8Q9HC52 389 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 FAM207AQ9NSI2 230 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 NAGPAQ9UK23 515 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CCL26Q9Y258 94 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 CPQQ9Y646 472 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF318Q5VUA4 2279 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 F8VZ95 297 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 LEFTY2O00292 366 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 MAN2B1O00754 1011 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 SLC9A3R1O14745 358 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 COCHO43405 550 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 RARGP13631 454 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 GLULP15104 373 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 KRT9P35527 623 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 ATP5C1P36542 298 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 KPNA1P52294 538 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 MLLT6P55198 1093 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 SNX16P57768 344 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 POLR2FP61218 127 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 YWHAGP61981 247 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 AMPD2Q01433 879 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 PM20D1Q6GTS8 502 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 DPY19L2P1Q6NXN4 242 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 TPRG1Q6ZUI0 275 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 LUZP1Q86V48 1076 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 FMNL3Q8IVF7 1028 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF276Q8N554 614 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 TTC16Q8NEE8 873 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 FLCNQ8NFG4 579 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 OSCP1Q8WVF1 389 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 GOLGA1Q92805 767 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 NOX5Q96PH1 765 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 ZSWIM1Q9BR11 485 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 NAA15Q9BXJ9 866 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 RNF38Q9H0F5 515 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 GANQ9H2C0 597 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 PDCL3Q9H2J4 239 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 TSPY26PQ9H489 355 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 C8orf33Q9H7E9 229 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 CCSER2Q9H7U1 834 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 TBC1D17Q9HA65 648 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 ST7Q9NRC1 585 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 DUS2Q9NX74 493 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 SIK3Q9Y2K2 1263 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 MRPS17Q9Y2R5 130 aaKnown RBP11.46□□□□□ -0.57
CHMP3-205ENST00000409810 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.57
CHMP3-205ENST00000409810 MYOFQ9NZM1 2061 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 KRBA1A5PL33 1030 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 TULP2O00295 520 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ARNTLO00327 626 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 CALCAP01258 141 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 LCP1P13796 627 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 STAT1P42224 750 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 GPD2P43304 727 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 RGS7P49802 495 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 KLK7P49862 253 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 CLCN5P51795 746 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 STARD6P59095 220 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ITPRIPL2Q3MIP1 535 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 C10orf120Q5SQS8 335 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 BTBD8Q5XKL5 378 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 PMF1Q6P1K2 205 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 LRSAM1Q6UWE0 723 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ZNF852Q6ZMS4 543 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 CACNA2D4Q7Z3S7 1137 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 CPA6Q8N4T0 437 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 STK32AQ8WU08 396 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 IRGQQ8WZA9 623 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ATP2A3Q93084 1043 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 EXOC4Q96A65 974 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 ZFYVE19Q96K21 471 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 LHX5Q9H2C1 402 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 NMUR1Q9HB89 426 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms