RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PCDH18Q9HCL0 1135 aa6.95□□□□□ -1.3
LSM5-203ENST00000409782 TXNRD2Q9NNW7 524 aa6.95□□□□□ -1.3
LSM5-203ENST00000409782 HELLSQ9NRZ9 838 aa6.95□□□□□ -1.3
LSM5-203ENST00000409782 PIH1D1Q9NWS0 290 aaKnown RBP6.95□□□□□ -1.3
LSM5-203ENST00000409782 BCCIPQ9P287 314 aaKnown RBP eCLIP6.95□□□□□ -1.3
LSM5-203ENST00000409782 MYO1AQ9UBC5 1043 aa6.95□□□□□ -1.3
LSM5-203ENST00000409782 GABRQQ9UN88 632 aa6.95□□□□□ -1.3
LSM5-203ENST00000409782 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
LSM5-203ENST00000409782 IGKV6D-41A0A0C4DH26 115 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 LRRC14BA6NHZ5 514 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 DBX1A6NMT0 343 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SMIM22K7EJ46 135 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 M0R3H8 397 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 N4BP3O15049 544 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 AKR1B10O60218 316 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 PLA2G6O60733 806 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SKAP2O75563 359 aaPredicted RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 LY86O95711 162 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 IGHDP01880 384 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 HMGCRP04035 888 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 KRT1P04264 644 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 CAPN2P17655 700 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 PFKLP17858 780 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 ARFIP2P53365 341 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 MAPK10P53779 464 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 WNT3AP56704 352 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SLC35G1Q2M3R5 365 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 KHDC1Q4VXA5 237 aaKnown RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 TMEM200BQ69YZ2 307 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SESTD1Q86VW0 696 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 FAM129CQ86XR2 697 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 MB21D1Q8N884 522 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 FANCBQ8NB91 859 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 BRIX1Q8TDN6 353 aaKnown RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 MZB1Q8WU39 189 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 ZNF480Q8WV37 535 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 TOX2Q96NM4 488 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SEC62Q99442 399 aaKnown RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 PAGR1Q9BTK6 254 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 GCM1Q9NP62 436 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 SARS2Q9NP81 518 aaKnown RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 SERHLQ9NQF3 203 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 RBPJLQ9UBG7 517 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 AFF4Q9UHB7 1163 aaKnown RBP6.94□□□□□ -1.3
LSM5-203ENST00000409782 SIK3Q9Y2K2 1263 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 PCDHGB2Q9Y5G2 931 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 CEP290O15078 2479 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 CCDC171Q6TFL3 1326 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 PLXNB2O15031 1838 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 PARP14Q460N5 1801 aa6.94□□□□□ -1.3
LSM5-203ENST00000409782 RLFQ13129 1914 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CENPFP49454 3210 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 A0A0D9SFI3 127 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 HIP1O00291 1037 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 HNRNPDLO14979 420 aaKnown RBP6.93□□□□□ -1.3
LSM5-203ENST00000409782 CNMDO75829 334 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 FLOT1O75955 427 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 GJB1P08034 283 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CCL5P13501 91 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 EEF2P13639 858 aaKnown RBP6.93□□□□□ -1.3
LSM5-203ENST00000409782 BRAFP15056 766 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 MALP21145 153 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 RGS2P41220 211 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 NT5C2P49902 561 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CDR1P51861 262 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 COG2Q14746 738 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 ALX1Q15699 326 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 KCNA10Q16322 511 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 MCMDC2Q4G0Z9 681 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 HYIQ5T013 277 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 FKBP15Q5T1M5 1219 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 GRAMD4Q6IC98 578 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CYP26C1Q6V0L0 522 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 RFX8Q6ZV50 586 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 PDZD4Q76G19 769 aaPredicted RBP6.93□□□□□ -1.3
LSM5-203ENST00000409782 GPR142Q7Z601 462 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 PLEKHH3Q7Z736 793 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 SIAH1Q8IUQ4 282 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CCDC33Q8N5R6 958 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 NAXEQ8NCW5 288 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 SHCBP1Q8NEM2 672 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 ALG3Q92685 438 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 SKA1Q96BD8 255 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 SIGLEC10Q96LC7 697 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 TRIM54Q9BYV2 358 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 PORCNQ9H237 461 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 CD320Q9NPF0 282 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 HOXC10Q9NYD6 342 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
LSM5-203ENST00000409782 SAE1Q9UBE0 346 aaPredicted RBP6.93□□□□□ -1.3
LSM5-203ENST00000409782 CNOT6Q9ULM6 557 aaKnown RBP6.93□□□□□ -1.3
LSM5-203ENST00000409782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms