RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 C10orf88Q9H8K7 445 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TMBIM4Q9HC24 238 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 LRRC4CQ9HCJ2 640 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PSD3Q9NYI0 1048 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 WHRNQ9P202 907 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PADI3Q9ULW8 664 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TIMM13Q9Y5L4 95 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CASTOR2A6NHX0 329 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SGK1O00141 431 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CLDN5O00501 218 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PRPSAP2O60256 369 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SETSIPP0DME0 302 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RARGP13631 454 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NDUFV2P19404 249 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SDC4P31431 198 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CHKAP35790 457 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ARSEP51690 589 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CLCNKBP51801 687 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX16P57768 344 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 OTUD4Q01804 1114 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 LMNB2Q03252 620 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 BST2Q10589 180 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SLMAPQ14BN4 828 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ACAP1Q15027 740 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 P3H1Q32P28 736 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CCDC14Q49A88 953 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ARHGAP17Q68EM7 881 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 AGMOQ6ZNB7 445 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 B3GALNT2Q8NCR0 500 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 GSTCDQ8NEC7 633 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 KLHDC9Q8NEP7 349 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CD99L2Q8TCZ2 262 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 HHIPL1Q96JK4 782 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TNIP3Q96KP6 325 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PEBP4Q96S96 227 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 MAK16Q9BXY0 300 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 EPB41L4BQ9H329 900 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TRMT13Q9NUP7 481 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 GPATCH2LQ9NWQ4 482 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NOVA2Q9UNW9 492 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC27A5Q9Y2P5 690 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ARL5CA6NH57 179 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 C3orf70A6NLC5 250 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 HMGB1P1B2RPK0 211 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TP73O15350 636 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 MGEA5O60502 916 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ACSL3O95573 720 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 POMCP01189 267 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NR1D1P20393 614 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 LRPAP1P30533 357 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PCK1P35558 622 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 BCAT1P54687 386 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 VCPP55072 806 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 MGAT3Q09327 533 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 GPS1Q13098 491 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ITGA7Q13683 1181 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PAN2Q504Q3 1202 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 IZUMO3Q5VZ72 239 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 OLFML1Q6UWY5 402 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DSTYKQ6XUX3 929 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 LEKR1Q6ZMV7 388 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 B4GALNT4Q76KP1 1039 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RNF180Q86T96 592 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TAB3Q8N5C8 712 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PCSK9Q8NBP7 692 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CMASQ8NFW8 434 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RAET1EQ8TD07 263 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM172AQ8WUF8 416 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NDRG1Q92597 394 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SENP8Q96LD8 212 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TSPAN18Q96SJ8 248 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PAAF1Q9BRP4 392 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 MED10Q9BTT4 135 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 DNAI2Q9GZS0 605 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RABEP2Q9H5N1 569 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CHST12Q9NRB3 414 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC38A7Q9NVC3 462 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SRRDQ9UH36 339 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 INPP5FQ9Y2H2 1132 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 NEU2Q9Y3R4 380 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RNF223E7ERA6 249 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 I3L4J1 428 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RIPK2O43353 540 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CAND2O75155 1236 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 CCNYL3P0C7X3 344 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PTPN1P18031 435 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TFE3P19532 575 aaPredicted RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 KLRC2P26717 231 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 TKTP29401 623 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 PTPN7P35236 360 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SLCO1A2P46721 670 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 RABGGTBP53611 331 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 ATXN1P54253 815 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 EIF3BP55884 814 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC8A3P57103 927 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 GNGT1P63211 74 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 KRT81Q14533 505 aa4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 OASLQ15646 514 aaKnown RBP4.16□□□□□ -1.74
LRRTM4-201ENST00000409088 KYNUQ16719 465 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms