RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 MT-CO3P00414 261 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 IGLV3-19P01714 112 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 GSPT1P15170 499 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CKMT2P17540 419 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PROZP22891 400 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ELAVL4P26378 380 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CD27P26842 260 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PCSK1P29120 753 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PNPLA4P41247 253 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 MLLT3P42568 568 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TXKP42681 527 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CTSKP43235 329 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LSSP48449 732 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DGKGP49619 791 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TPMTP51580 245 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SMTNP53814 917 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CDH8P55286 799 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CLDN6P56747 220 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DAB2P98082 770 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 EXOSC10Q01780 885 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 BNC1Q01954 994 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ARID5AQ03989 594 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SPAG1Q07617 926 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TMEM132DQ14C87 1099 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 NECTIN1Q15223 517 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 MAPRE1Q15691 268 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ENOX2Q16206 610 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DDR2Q16832 855 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TTC31Q49AM3 519 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SPATA1Q5VX52 437 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 C9orf57Q5W0N0 161 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 RHBDF2Q6PJF5 856 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 BLOC1S2Q6QNY1 142 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ZPBP2Q6X784 338 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 Q6ZUG5 572 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PIK3AP1Q6ZUJ8 805 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DENND5BQ6ZUT9 1274 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 USP53Q70EK8 1073 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ATCAYQ86WG3 371 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 GATAD2AQ86YP4 633 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TMEM86AQ8N2M4 240 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PHTF2Q8N3S3 785 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ARL14Q8N4G2 192 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 EID2Q8N6I1 236 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 RDH13Q8NBN7 331 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PDZD8Q8NEN9 1154 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 BRF1Q92994 677 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 GRAMD1AQ96CP6 724 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 FAM212AQ96EL1 285 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CCNL2Q96S94 520 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ELF4Q99607 663 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 TIPINQ9BVW5 301 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 NACA2Q9H009 215 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LSG1Q9H089 658 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 BTBD1Q9H0C5 482 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SLC6A17Q9H1V8 727 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LHX5Q9H2C1 402 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 POLR1BQ9H9Y6 1135 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 FBRSQ9HAH7 460 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PTPRHQ9HD43 1115 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SPHK2Q9NRA0 654 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SMPD4Q9NXE4 827 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 WDR35Q9P2L0 1181 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LSM7Q9UK45 103 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DERAQ9Y315 318 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 R3HCC1Q9Y3T6 440 aaKnown RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 RAD54BQ9Y620 910 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 STON1Q9Y6Q2 735 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 PTPRQQ9UMZ3 2332 aa4.12□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ANTXRLA6NF34 631 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LACTBL1A8MY62 500 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 KPNA7A9QM74 516 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 NEDD8-MDP1E9PL57 170 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 HNRNPDLO14979 420 aaKnown RBP4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 VILLO15195 856 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CYP26A1O43174 497 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CACNG3O60359 315 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 HUS1O60921 280 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 USP12O75317 370 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 FSBPO95073 299 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SEMA4FO95754 770 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 DNTTP04053 509 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 MPOP05164 745 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ALPPL2P10696 532 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 SCP2P22307 547 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ACP1P24666 158 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 CYP2F1P24903 491 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 RPA1P27694 616 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 EPHA8P29322 1005 aaPredicted RBP4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 ABCD1P33897 745 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 KRT2P35908 639 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 GRIK1P39086 918 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 MAGEA11P43364 429 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 NPTX2P47972 431 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 GPR15P49685 360 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 LIG4P49917 911 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 RACK1P63244 317 aaKnown RBP4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 NFKB2Q00653 900 aa4.11□□□□□ -1.75
RNU6ATAC-201ENST00000408749 INSM1Q01101 510 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms