RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 F5P12259 2224 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 NRG2O14511 850 aaPredicted RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 P4HA2O15460 535 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 COCHO43405 550 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 CILPO75339 1184 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 EPN2O95208 641 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 KAT7O95251 611 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 VNN1O95497 513 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 CYP17A1P05093 508 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 GBP1P32455 592 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 ASPAP45381 313 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 CDH8P55286 799 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 USP46P62068 366 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 GAS6Q14393 721 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 DCAF17Q5H9S7 520 aaPredicted RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 HTR3DQ70Z44 454 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 RSRC2Q7L4I2 434 aaKnown RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 CCDC186Q7Z3E2 898 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 HEXIM2Q96MH2 286 aaKnown RBP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 SPHK2Q9NRA0 654 aa13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 BCCIPQ9P287 314 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNORD88B-201ENST00000408454 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 CLDN5O00501 218 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 SLC30A4O14863 429 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 MAP3K13O43283 966 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 HCRTO43612 131 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ZNF217O75362 1048 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ZDHHC11BP0C7U3 371 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ZNF806P0C7X5 589 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ACO1P21399 889 aaKnown RBP13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ADORA2BP29275 332 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 HOXD12P35452 270 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 CDR1P51861 262 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 BCAT1P54687 386 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 ANO4Q32M45 955 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 SLC36A4Q6YBV0 504 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 USP33Q8TEY7 942 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 RMDN1Q96DB5 314 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 SLC22A12Q96S37 553 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 IRX2Q9BZI1 471 aaPredicted RBP13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 CHORDC1Q9UHD1 332 aaPredicted RBP13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 NAGPAQ9UK23 515 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 MAPK8IP1Q9UQF2 711 aa13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 RIF1Q5UIP0 2472 aaKnown RBP13.55□□□□□ -0.24
SNORD88B-201ENST00000408454 DENND4CQ5VZ89 1909 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 A0A0A0MRY4 1105 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 HRO43593 1189 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CCDC130P13994 396 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CD58P19256 250 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 DLG4P78352 724 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 STARD3Q14849 445 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CRY1Q16526 586 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 ZCWPW2Q504Y3 356 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 FMR1NBQ8N0W7 255 aaPredicted RBP13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 DCLK2Q8N568 766 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 TAS1R2Q8TE23 839 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CHFRQ96EP1 664 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 RNF38Q9H0F5 515 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 LRRC4Q9HBW1 653 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CISHQ9NSE2 258 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 GMIPQ9P107 970 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 WDFY4Q6ZS81 3184 aa13.54□□□□□ -0.24
SNORD88B-201ENST00000408454 OBSL1O75147 1896 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 GFRA2O00451 464 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 PMM2O15305 246 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 MCCD1P59942 119 aaPredicted RBP13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 LMAN2Q12907 356 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 LPAL2Q16609 132 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
SNORD88B-201ENST00000408454 ARHGAP17Q68EM7 881 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms