RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 GAB3Q8WWW8 586 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 TSG101Q99816 390 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 DLL3Q9NYJ7 618 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 PCDHA5Q9Y5H7 936 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 SDK1Q7Z5N4 2213 aa16.24■□□□□ 0.19
TPM1-207ENST00000403994 TRIM49BA6NDI0 452 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 K7EQS6 105 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 STX10O60499 249 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 LRP3O75074 770 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 RPP40O75818 363 aaKnown RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 ADH5P11766 374 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 EIF2DP41214 584 aaKnown RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 SEC13P55735 322 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 FOXK2Q01167 660 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 SPEM2Q0P670 501 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 DMC1Q14565 340 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 RSPO4Q2I0M5 234 aaPredicted RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 SFTPA1Q8IWL2 248 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 ADGRG2Q8IZP9 1017 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 FAM160A2Q8N612 972 aaPredicted RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 USP33Q8TEY7 942 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 WBP2Q969T9 261 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 OTUB2Q96DC9 234 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 CYFIP2Q96F07 1278 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 TIGD1Q96MW7 591 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 DUSP9Q99956 384 aaKnown RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 NACA2Q9H009 215 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
TPM1-207ENST00000403994 TBC1D14Q9P2M4 693 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 SCML2Q9UQR0 700 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 SH3BP1Q9Y3L3 701 aa16.23■□□□□ 0.19
TPM1-207ENST00000403994 ANTXRLA6NF34 631 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 APBB3O95704 486 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 IRF1P10914 325 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 CHRM1P11229 460 aaPredicted RBP16.22■□□□□ 0.19
TPM1-207ENST00000403994 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
TPM1-207ENST00000403994 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 KDSRQ06136 332 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 PUM1Q14671 1186 aaKnown RBP eCLIP16.22■□□□□ 0.195e-9■□□□□ 8.1
TPM1-207ENST00000403994 ZNF394Q53GI3 561 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 PPP1R26Q5T8A7 1209 aaPredicted RBP16.22■□□□□ 0.19
TPM1-207ENST00000403994 TCERG1LQ5VWI1 586 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 BBS7Q8IWZ6 715 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 CAMKK1Q8N5S9 505 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 FAXDC2Q96IV6 333 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 CYLDQ9NQC7 956 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 CISHQ9NSE2 258 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 OSER1Q9NX31 292 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 RAB20Q9NX57 234 aa16.22■□□□□ 0.19
TPM1-207ENST00000403994 GREM1O60565 184 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 TBX18O95935 607 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 SLC6A11P48066 632 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 KIF11P52732 1056 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
TPM1-207ENST00000403994 C2orf27AQ580R0 203 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 DGLUCYQ7Z3D6 616 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 KBTBD6Q86V97 674 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 PHTF2Q8N3S3 785 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 SLC4A11Q8NBS3 891 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 SLC35C1Q96A29 364 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
TPM1-207ENST00000403994 DNAI2Q9GZS0 605 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 NMUR1Q9HB89 426 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 SEMA4GQ9NTN9 838 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 HOOK1Q9UJC3 728 aaKnown RBP16.21■□□□□ 0.19
TPM1-207ENST00000403994 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
TPM1-207ENST00000403994 PLXND1Q9Y4D7 1925 aa16.21■□□□□ 0.19
TPM1-207ENST00000403994 A0A1W2PQH9 124 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 PRR5-ARHGAP8B1AHC4 643 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 AXIN1O15169 862 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 HOXC11O43248 304 aaPredicted RBP16.2■□□□□ 0.18
TPM1-207ENST00000403994 KAT7O95251 611 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 RAD23BP54727 409 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 ARHGAP8P85298 464 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 ETFBKMTQ8IXQ9 262 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 TSTD1Q8NFU3 115 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 PNKPQ96T60 521 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 KLF16Q9BXK1 252 aaPredicted RBP16.2■□□□□ 0.18
TPM1-207ENST00000403994 DUSP16Q9BY84 665 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 FAM124BQ9H5Z6 455 aaPredicted RBP16.2■□□□□ 0.18
TPM1-207ENST00000403994 ARHGEF4Q9NR80 690 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.183e-7■■■□□ 15.3
TPM1-207ENST00000403994 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 CDV3Q9UKY7 258 aaKnown RBP16.2■□□□□ 0.18
TPM1-207ENST00000403994 MMP17Q9ULZ9 603 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 COQ4Q9Y3A0 265 aa16.2■□□□□ 0.18
TPM1-207ENST00000403994 MYO18AQ92614 2054 aaKnown RBP16.19■□□□□ 0.18
TPM1-207ENST00000403994 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms