RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.21■□□□□ 0.83
RTN4-207ENST00000402434 CPQQ9Y646 472 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 A0A1W2PQH9 124 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 KANSL1LA0AUZ9 987 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 LGALS16A8MUM7 142 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 M0QYV0 167 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 MED7O43513 233 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 PI15O43692 258 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 GABBR2O75899 941 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 MBL2P11226 248 aaPredicted RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 ATP1A3P13637 1013 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 GNA15P30679 374 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 USP8P40818 1118 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 GPD2P43304 727 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 VCPP55072 806 aaKnown RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 TNK2Q07912 1038 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 PDGFRLQ15198 375 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 CC2D1AQ6P1N0 951 aaPredicted RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 TPRG1Q6ZUI0 275 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 SCML4Q8N228 414 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 TMEM105Q8N8V8 129 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 CSGALNACT1Q8TDX6 532 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 SECISBP2LQ93073 1101 aaKnown RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
RTN4-207ENST00000402434 LRRC4Q9HBW1 653 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 GTSE1Q9NYZ3 720 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 PIAS3Q9Y6X2 628 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 TICRRQ7Z2Z1 1910 aa20.2■□□□□ 0.82
RTN4-207ENST00000402434 MAN2B1O00754 1011 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 RPL34P49207 117 aaKnown RBP20.19■□□□□ 0.82
RTN4-207ENST00000402434 DRAP1Q14919 205 aaPredicted RBP20.19■□□□□ 0.82
RTN4-207ENST00000402434 ZSCAN23Q3MJ62 389 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 ZNF852Q6ZMS4 543 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.829e-7■■□□□ 12.1
RTN4-207ENST00000402434 ARHGAP18Q8N392 663 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 MSANTD3Q96H12 275 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 HSFY1Q96LI6 401 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 NELL2Q99435 816 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 OSBPL6Q9BZF3 934 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 ULBP1Q9BZM6 244 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 GANQ9H2C0 597 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 C8orf33Q9H7E9 229 aaPredicted RBP20.19■□□□□ 0.82
RTN4-207ENST00000402434 HPS4Q9NQG7 708 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 SMPD4Q9NXE4 827 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 NAGPAQ9UK23 515 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 SIK3Q9Y2K2 1263 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 MYO16Q9Y6X6 1858 aa20.19■□□□□ 0.82
RTN4-207ENST00000402434 STK25O00506 426 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 THAP12O43422 761 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 TBX18O95935 607 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 RARGP13631 454 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 CD72P21854 359 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 CLCN1P35523 988 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 ATP5C1P36542 298 aaKnown RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 PTK2Q05397 1052 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 ADIGQ0VDE8 80 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 RUNX3Q13761 415 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 ITPRIPL2Q3MIP1 535 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 TRIM68Q6AZZ1 485 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 C1orf228Q6PIY5 440 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 BHLHA9Q7RTU4 235 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 PJA1Q8NG27 643 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 STK32AQ8WU08 396 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 STK33Q9BYT3 514 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 CNGB3Q9NQW8 809 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 DUS2Q9NX74 493 aaKnown RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 SIT1Q9Y3P8 196 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 COL4A3Q01955 1670 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 CAVIN2O95810 425 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 RALAP11233 206 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 KLK7P49862 253 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 NUBP1P53384 320 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 EML3Q32P44 896 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 DENND1BQ6P3S1 775 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 RALGPS2Q86X27 583 aaPredicted RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 ZNF687Q8N1G0 1237 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 CDK5RAP1Q96SZ6 601 aaKnown RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 FOXQ1Q9C009 403 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 NACA2Q9H009 215 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 LINC00597Q9H2U6 94 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 EBF3Q9H4W6 596 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 LTB4R2Q9NPC1 389 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 CFAP97Q9P2B7 532 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 PCDHGC3Q9UN70 934 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 MRPS17Q9Y2R5 130 aaKnown RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 MTF2Q9Y483 593 aaPredicted RBP20.18■□□□□ 0.82
RTN4-207ENST00000402434 DAAM1Q9Y4D1 1078 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 WNT6Q9Y6F9 365 aa20.18■□□□□ 0.82
RTN4-207ENST00000402434 KMT2EQ8IZD2 1858 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 E2F8A0AVK6 867 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 PNMA6AP0CW24 399 aaPredicted RBP20.17■□□□□ 0.82
RTN4-207ENST00000402434 ARSAP15289 507 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 COL9A1P20849 921 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 RGS7P49802 495 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 KPNA1P52294 538 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms