RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
SKA3-203ENST00000400018 ZCWPW1Q9H0M4 648 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 CYP4F11Q9HBI6 524 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
SKA3-203ENST00000400018 TMEM59LQ9UK28 342 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 DAAM1Q9Y4D1 1078 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 NLRC5Q86WI3 1866 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 H0YGN5 161 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 GRM6O15303 877 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 PROSCO94903 275 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 ATF6P18850 670 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 PEX5P50542 639 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 BHLHA9Q7RTU4 235 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 DDX47Q9H0S4 455 aaKnown RBP12.25□□□□□ -0.45
SKA3-203ENST00000400018 INTUQ9ULD6 942 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 PLXNA4Q9HCM2 1894 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 KIAA1671Q9BY89 1806 aa12.25□□□□□ -0.45
SKA3-203ENST00000400018 A0A0A6YYK5 440 aaPredicted RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 LINC01553A4QN01 128 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 C2CD4BA6NLJ0 364 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 SIGLEC16A6NMB1 481 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 XPO1O14980 1071 aaKnown RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 TEX28O15482 410 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 PLCB3Q01970 1234 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 USP41Q3LFD5 358 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 PPP6R3Q5H9R7 873 aaPredicted RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 FMNL3Q8IVF7 1028 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 MNS1Q8NEH6 495 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 C1orf54Q8WWF1 131 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 CD101Q93033 1021 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 R3HDM2Q9Y2K5 976 aaKnown RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 A0A1W2PQH9 124 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 HOXA2O43364 376 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 CNPP09543 421 aaKnown RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 RFC2P35250 354 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 PLA2G4AP47712 749 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 MRPL58Q14197 206 aaKnown RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 OTUD1Q5VV17 481 aaPredicted RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 SLC7A14Q8TBB6 771 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 L2HGDHQ9H9P8 463 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 UVRAGQ9P2Y5 699 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 RFPL2O75678 378 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 ANXA13P27216 316 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 GABRB2P47870 512 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 HDAC4P56524 1084 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 MRPS5P82675 430 aaKnown RBP12.24□□□□□ -0.45
SKA3-203ENST00000400018 CAMK1Q14012 370 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 CCDC181Q5TID7 509 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 RASIP1Q5U651 963 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 NPNTQ6UXI9 565 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 MIB1Q86YT6 1006 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 TCF25Q9BQ70 676 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 SPG21Q9NZD8 308 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 GMIPQ9P107 970 aa12.24□□□□□ -0.45
SKA3-203ENST00000400018 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 BTNL10A8MVZ5 291 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 TMEM189-UBE2V1I3L0A0 370 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 MOCS2O96007 188 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 RALAP11233 206 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 TYMPP19971 482 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 SYCP2LQ5T4T6 812 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 CYP4V2Q6ZWL3 525 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 POF1BQ8WVV4 589 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 TRIM31Q9BZY9 425 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 AVENQ9NQS1 362 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 PIGVQ9NUD9 493 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 KIAA1257Q9ULG3 409 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 GBF1Q92538 1859 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 M0QYT0 321 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 CAPN9O14815 690 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 SLU7O95391 586 aaKnown RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 CXCL14O95715 111 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 ZBED1O96006 694 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 SOD2P04179 222 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 RARAP10276 462 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 GPD1P21695 349 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 SULT1E1P49888 294 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 DAOAP59103 153 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 MTM1Q13496 603 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 TRIP13Q15645 432 aaPredicted RBP12.23□□□□□ -0.45
SKA3-203ENST00000400018 BSPRYQ5W0U4 402 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 SCD5Q86SK9 330 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 GDPD5Q8WTR4 605 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 CYP2S1Q96SQ9 504 aa12.23□□□□□ -0.45
SKA3-203ENST00000400018 KRT12Q99456 494 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms