RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 C12orf42Q96LP6 360 aa20.33■□□□□ 0.85
COL13A1-205ENST00000398978 CXCL16Q9H2A7 254 aa20.33■□□□□ 0.85
COL13A1-205ENST00000398978 GSC2O15499 205 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 KCNJ11Q14654 390 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 PRKD1Q15139 912 aaPredicted RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 CCDC6Q16204 474 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 MROH9Q5TGP6 573 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 DNERQ8NFT8 737 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 LHX5Q9H2C1 402 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 DOCK1Q14185 1865 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 DNAH12Q6ZR08 3092 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 SIP14410 1827 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 FCHO1O14526 889 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 SMNDC1O75940 238 aaKnown RBP eCLIP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 NOMO1Q15155 1222 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 TAZQ16635 292 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 DALRD3Q5D0E6 543 aaKnown RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 CDCA2Q69YH5 1023 aaPredicted RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 ANO7Q6IWH7 933 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 MCUR1Q96AQ8 359 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 PTCD3Q96EY7 689 aaKnown RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 NSL1Q96IY1 281 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 CLPTM1LQ96KA5 538 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 BTBD10Q9BSF8 475 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 B3GNT5Q9BYG0 378 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 PLAC1Q9HBJ0 212 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 PTPRHQ9HD43 1115 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 FAM49BQ9NUQ9 324 aa20.33■□□□□ 0.84
COL13A1-205ENST00000398978 ZC3H7BQ9UGR2 993 aaKnown RBP20.33■□□□□ 0.84
COL13A1-205ENST00000398978 ENO1P06733 434 aaKnown RBP20.32■□□□□ 0.84
COL13A1-205ENST00000398978 STAG3L1P0CL83 205 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 NDST1P52848 882 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 CDK16Q00536 496 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 CAPRIN2Q6IMN6 1127 aaKnown RBP20.32■□□□□ 0.84
COL13A1-205ENST00000398978 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 SH2D5Q6ZV89 423 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 ARID3BQ8IVW6 561 aaPredicted RBP20.32■□□□□ 0.84
COL13A1-205ENST00000398978 YIPF3Q9GZM5 350 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 RSAD1Q9HA92 442 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 USP29Q9HBJ7 922 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 PCMTD2Q9NV79 361 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 TAS2R1Q9NYW7 299 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 TTLL3Q9Y4R7 772 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 ACKR2O00590 384 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 PRPSAP2O60256 369 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 ESRRAP11474 423 aaPredicted RBP20.32■□□□□ 0.84
COL13A1-205ENST00000398978 GPD1P21695 349 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 RASA2Q15283 850 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 GADL1Q6ZQY3 521 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 SCUBE3Q8IX30 993 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 GPR20Q99678 358 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 MIS12Q9H081 205 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 ASNSD1Q9NWL6 643 aa20.32■□□□□ 0.84
COL13A1-205ENST00000398978 HCRTO43612 131 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CILPO75339 1184 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 GMPRP36959 345 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CCNHP51946 323 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CRADDP78560 199 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 TMPRSS15P98073 1019 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 TSHZ1Q6ZSZ6 1077 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 PLD5Q8N7P1 536 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 PPP1R13LQ8WUF5 828 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 NRG4Q8WWG1 115 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 SKA1Q96BD8 255 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 SPATA33Q96N06 139 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 C20orf27Q9GZN8 174 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 SSU72Q9NP77 194 aaKnown RBP20.31■□□□□ 0.84
COL13A1-205ENST00000398978 PDGFCQ9NRA1 345 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 TSPAN16Q9UKR8 245 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 EFR3BQ9Y2G0 817 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 E2F8A0AVK6 867 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 B4GALT4O60513 344 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CCDC22O60826 627 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CSH1P0DML2 217 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 CSH2P0DML3 217 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 IL4RP24394 825 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 KDSRQ06136 332 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 BST1Q10588 318 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 MXD4Q14582 209 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-205ENST00000398978 MUM1Q2TAK8 710 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 HSF5Q4G112 596 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-205ENST00000398978 TREML1Q86YW5 311 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 SHKBP1Q8TBC3 707 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 FNIP1Q8TF40 1166 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 MCRS1Q96EZ8 462 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 BCO2Q9BYV7 579 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 RNPEPQ9H4A4 650 aa20.31■□□□□ 0.84
COL13A1-205ENST00000398978 H3BRJ5 948 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 ZBED1O96006 694 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 F7P08709 466 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 GCKP35557 465 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MRPS5P82675 430 aaKnown RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 CAND1Q86VP6 1230 aaKnown RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 OXNAD1Q96HP4 312 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-205ENST00000398978 PPCSQ9HAB8 311 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MCM3APO60318 1980 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 MAP3K13O43283 966 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 DHRS4L1P0CG22 281 aa20.3■□□□□ 0.84
COL13A1-205ENST00000398978 PROZP22891 400 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms