RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 PRKD1Q15139 912 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 PPP6R3Q5H9R7 873 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 IYDQ6PHW0 289 aa10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 EMC1Q8N766 993 aa10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 OR6Y1Q8NGX8 325 aa10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 RBM17Q96I25 401 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 PPP1R36Q96LQ0 422 aa10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 STRA6Q9BX79 667 aa10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 DNAAF2Q9NVR5 837 aaKnown RBP10.29□□□□□ -0.76
PTCHD4-202ENST00000398738 IQANK1A0A1B0GTG1 560 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TCRBV9S1A1TA0A576 114 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 PROCP04070 461 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 FAM200BP0CF97 657 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 VAV1P15498 845 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NCF2P19878 526 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CYP24A1Q07973 514 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ORC1Q13415 861 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 KLHL38Q2WGJ6 581 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CMPK2Q5EBM0 449 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TMEM179Q6ZVK1 233 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 RFX6Q8HWS3 928 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 APLFQ8IW19 511 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 GDPD5Q8WTR4 605 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 FAM192AQ9GZU8 254 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 APPL1Q9UKG1 709 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 MAD1L1Q9Y6D9 718 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TM9SF1O15321 606 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ZNF862O60290 1169 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 SERPINB2P05120 415 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NOMO3P69849 1222 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NPNTQ6UXI9 565 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 PPIL6Q8IXY8 311 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 SEPT12Q8IYM1 358 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 PPP2R3CQ969Q6 453 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ZBTB45Q96K62 511 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 C20orf27Q9GZN8 174 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ACSS3Q9H6R3 686 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 RPL26L1Q9UNX3 145 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 SH3BP1Q9Y3L3 701 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NAV1Q8NEY1 1877 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CAPN8A6NHC0 703 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TM7SF2O76062 418 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 GTF2H1P32780 548 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ACTR3P61158 418 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 GTF2BQ00403 316 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 MAP7Q14244 749 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TAF5Q15542 800 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 HSF5Q4G112 596 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CES4AQ5XG92 561 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 DNAJC14Q6Y2X3 702 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CRLF3Q8IUI8 442 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 RELL1Q8IUW5 271 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ZNF398Q8TD17 642 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NAT14Q8WUY8 206 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 NR1H4Q96RI1 486 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 IWS1Q96ST2 819 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 TAGLN3Q9UI15 199 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 ADAMTS6Q9UKP5 1117 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 SHOC2Q9UQ13 582 aa10.28□□□□□ -0.76
PTCHD4-202ENST00000398738 A8MXQ7 604 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 GMPRP36959 345 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 COG7P83436 770 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 ACAP1Q15027 740 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 TRMT5Q32P41 509 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 TFDP3Q5H9I0 405 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 ZBTB41Q5SVQ8 909 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 SLC39A4Q6P5W5 647 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 TMEM161BQ8NDZ6 487 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 TRIM11Q96F44 468 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 APOPT1Q96IL0 206 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 PIH1D1Q9NWS0 290 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 CHCHD3Q9NX63 227 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 IP6K2Q9UHH9 426 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 hCG_1818297A0A087WSY0 165 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 NFIBO00712 420 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 CD19P15391 556 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 VCLP18206 1134 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 PSMA2P25787 234 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 OASLQ15646 514 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 VWA5B1Q5TIE3 1220 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 DARS2Q6PI48 645 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 C1orf228Q6PIY5 440 aa10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 RBM44Q6ZP01 1051 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-202ENST00000398738 LDHDQ86WU2 507 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms