RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RAB33AQ14088 237 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 C9orf50Q5SZB4 431 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 SCN4BQ8IWT1 228 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 KLHL23Q8NBE8 558 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 MS4A14Q96JA4 679 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 RNPC3Q96LT9 517 aaKnown RBP20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 ATG2AQ2TAZ0 1938 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 DENND4CQ5VZ89 1909 aa20.39■□□□□ 0.85
PDLIM2-205ENST00000397761 LINC01553A4QN01 128 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CTIFO43310 598 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CEP104O60308 925 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 ENDOD1O94919 500 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 LTFP02788 710 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 PYGMP11217 842 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 NOS2P35228 1153 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 PAFAH1B1P43034 410 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CREMQ03060 361 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CLUL1Q15846 466 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 C15orf59Q2T9L4 293 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 HFE2Q6ZVN8 426 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 DEFB106AQ8N104 65 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 NUP93Q8N1F7 819 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 EXD1Q8NHP7 514 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 SCAMP5Q8TAC9 235 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 NPY6RQ99463 290 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 ADAM33Q9BZ11 813 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 MRPL17Q9NRX2 175 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 EHD2Q9NZN4 543 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 MAFFQ9ULX9 164 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 SSX2IPQ9Y2D8 614 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 ANAPC1Q9H1A4 1944 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 OBSL1O75147 1896 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CHD9Q3L8U1 2897 aa20.38■□□□□ 0.85
PDLIM2-205ENST00000397761 CTAGE15A4D2H0 777 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 C5orf67F2Z3F1 127 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 PGRMC1O00264 195 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 C2CD2LO14523 706 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 CTAGE8P0CG41 777 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 ATF2P15336 505 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 MIPP30301 263 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 RPL10AP62906 217 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 DDR2Q16832 855 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 SLC25A52Q3SY17 297 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 SH3PXD2AQ5TCZ1 1133 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 CCDC181Q5TID7 509 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 OTUD1Q5VV17 481 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 TXNRD3NBQ6F5E7 133 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 CYP4V2Q6ZWL3 525 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 STRADAQ7RTN6 431 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 CTAGE6Q86UF2 777 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 CTAGE4Q8IX94 777 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 FAM149B1Q96BN6 582 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 TRIM62Q9BVG3 475 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 COMMD8Q9NX08 183 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 EFCAB8A8MWE9 144 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 KRT7P08729 469 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 IL1R2P27930 398 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 GPR15P49685 360 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 HDAC4P56524 1084 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 DUSP4Q13115 394 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 HADHQ16836 314 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 RSRC2Q7L4I2 434 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 FAM172AQ8WUF8 416 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 FBXO44Q9H4M3 255 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 DDX56Q9NY93 547 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 RRN3Q9NYV6 651 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 SMARCAL1Q9NZC9 954 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 USP18Q9UMW8 372 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 SCML2Q9UQR0 700 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 SLC27A5Q9Y2P5 690 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 IRAK3Q9Y616 596 aa20.37■□□□□ 0.85
PDLIM2-205ENST00000397761 TRUB2O95900 331 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 DESP17661 470 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 TFE3P19532 575 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 TUFMP49411 452 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 ATP11AP98196 1134 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 ZNF211Q13398 564 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 SHHQ15465 462 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 RAB6CQ53S08 254 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 DCAF6Q58WW2 860 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 SYPL2Q5VXT5 272 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 SPATA4Q8NEY3 305 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 CMASQ8NFW8 434 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 PGAP3Q96FM1 320 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 PEBP4Q96S96 227 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 TBCBQ99426 244 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 RAB6CQ9H0N0 254 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 STAP1Q9ULZ2 295 aa20.36■□□□□ 0.85
PDLIM2-205ENST00000397761 RTN3O95197 1032 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 ZRANB2O95218 330 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 FGGP02679 453 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 ATF6P18850 670 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 CTNNB1P35222 781 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 PTPN7P35236 360 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 SSR1P43307 286 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 TUBB4BP68371 445 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 UBE3AQ05086 875 aa20.35■□□□□ 0.85
PDLIM2-205ENST00000397761 MGAT5BQ3V5L5 792 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms