RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 AQP5P55064 265 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 NRG3P56975 720 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 CENPCQ03188 943 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PTSQ03393 145 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC157Q569K6 752 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TIGD7Q6NT04 549 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 CDK20Q8IZL9 346 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SEPHS2Q99611 448 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TRPC4Q9UBN4 977 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 NEDD4P46934 1319 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 A0A0X1KG70 313 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PTGES3LE9PB15 166 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TEX33O43247 280 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PSIP1O75475 530 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PFKFB3Q16875 520 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 GRIP2Q9C0E4 1043 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 DSEQ9UL01 958 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PPIEQ9UNP9 301 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 VCLP18206 1134 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 WDR72Q3MJ13 1102 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CLVS1Q8IUQ0 354 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 UNC5CLQ8IV45 518 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC3Q9BQI4 270 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 R3HDM2Q9Y2K5 976 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 WBP11Q9Y2W2 641 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RAG1P15918 1043 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 MTTPP55157 894 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 DCAF6Q58WW2 860 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 USP17L6PQ6QN14 398 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 DENND5BQ6ZUT9 1274 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RASGRP2Q7LDG7 609 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF605Q86T29 641 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 IQCF2Q8IXL9 164 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 NUAK2Q9H093 628 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 STOML2Q9UJZ1 356 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ATP6V1G2O95670 118 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PDHA2P29803 388 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PTGER2P43116 358 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RALGDSQ12967 914 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 LMBRD2Q68DH5 695 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SERAC1Q96JX3 654 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PNKPQ96T60 521 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 EIF2AK1Q9BQI3 630 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RIBC2Q9H4K1 309 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SCUBE2Q9NQ36 999 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PABPC1P11940 636 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 FCER1AP12319 257 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF24P17028 368 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ACADLP28330 430 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 TIMM50Q3ZCQ8 353 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PCNX4Q63HM2 1172 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 B3GNT6Q6ZMB0 384 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SGF29Q96ES7 293 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CAMK1Q14012 370 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PRCCQ92733 491 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 DGCR6LQ9BY27 220 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CELF4Q9BZC1 486 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 BMP10O95393 424 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ENO2P09104 434 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 TGM3Q08188 693 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CHPFQ8IZ52 775 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 DBNDD1Q9H9R9 158 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 MAPRE3Q9UPY8 281 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SCN8AQ9UQD0 1980 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PLOD3O60568 738 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CPSF4O95639 269 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 PDGFRAP16234 1089 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 MAGEA2P43356 314 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RGS7P49802 495 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 SLC20A2Q08357 652 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 WDR60Q8WVS4 1066 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF184Q99676 751 aaPredicted RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 FBXO28Q9NVF7 368 aa10.63□□□□□ -0.71
COL4A4-201ENST00000396625 RUVBL2Q9Y230 463 aaKnown RBP10.63□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC162PA2VCL2 907 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 H3BMM5 538 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 INPP4BO15327 924 aa10.62□□□□□ -0.71
COL4A4-201ENST00000396625 DYNC1LI2O43237 492 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms