RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MAPK13O15264 365 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 CSRP1P21291 193 aaKnown RBP17.26■□□□□ 0.35
CLTA-203ENST00000396603 ENPEPQ07075 957 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 LMAN2Q12907 356 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 CUL4BQ13620 913 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 ZACNQ401N2 412 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 PAQR9Q6ZVX9 377 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 LPCAT2Q7L5N7 544 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 TXNDC5Q8NBS9 432 aaKnown RBP17.26■□□□□ 0.35
CLTA-203ENST00000396603 TMC2Q8TDI7 906 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 KCNK16Q96T55 309 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 TPSD1Q9BZJ3 242 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 SMOC1Q9H4F8 434 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 SMYD3Q9H7B4 428 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 PNPLA8Q9NP80 782 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 TMEM9BQ9NQ34 198 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 STARD13Q9Y3M8 1113 aa17.26■□□□□ 0.35
CLTA-203ENST00000396603 KIF20AO95235 890 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 SLC6A11P48066 632 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 LY6G5CQ5SRR4 150 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 TCEAL6Q6IPX3 200 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 TMEM92Q6UXU6 159 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 FUKQ8N0W3 1084 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 ALLCQ8N6M5 410 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 PLEKHO2Q8TD55 490 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 TCEAL3Q969E4 200 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 MED10Q9BTT4 135 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 TLR8Q9NR97 1041 aaKnown RBP17.25■□□□□ 0.35
CLTA-203ENST00000396603 SPHK2Q9NRA0 654 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 DEC1Q9P2X7 70 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 HOOK1Q9UJC3 728 aaKnown RBP17.25■□□□□ 0.35
CLTA-203ENST00000396603 LAMA1P25391 3075 aa17.25■□□□□ 0.35
CLTA-203ENST00000396603 ZFHX4Q86UP3 3567 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 SGK1O00141 431 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 KLRC4O43908 158 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 AP1G2O75843 785 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 KLF8O95600 359 aaPredicted RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 CEACAM1P13688 526 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 TIE1P35590 1138 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 AFMP43652 599 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CASP4P49662 377 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 NDUFA8P51970 172 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CDH8P55286 799 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 GOLGA8FQ08AF8 430 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 GOLGA8DPQ0D2H9 430 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 IFRD2Q12894 506 aaPredicted RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 PEAR1Q5VY43 1037 aaPredicted RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 KLHDC10Q6PID8 442 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 HTR3DQ70Z44 454 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CCDC33Q8N5R6 958 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 TERB1Q8NA31 727 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 DNAI2Q9GZS0 605 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 KCTD10Q9H3F6 313 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CYLDQ9NQC7 956 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 KRT82Q9NSB4 513 aa17.24■□□□□ 0.35
CLTA-203ENST00000396603 CHORDC1Q9UHD1 332 aaPredicted RBP17.24■□□□□ 0.35
CLTA-203ENST00000396603 C4orf47A7E2U8 309 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
CLTA-203ENST00000396603 TLR5O60602 858 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 ADAM23O75077 832 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 VNN1O95497 513 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 BCKDHBP21953 392 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 KCNA4P22459 653 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 CASP1P29466 404 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 STK4Q13043 487 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 NFIL3Q16649 462 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 PSAPL1Q6NUJ1 521 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 RABEPKQ7Z6M1 372 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 SYT12Q8IV01 421 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 SCAMP5Q8TAC9 235 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 FAXDC2Q96IV6 333 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 NACA2Q9H009 215 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 CCSER2Q9H7U1 834 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 MARK1Q9P0L2 795 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 GMIPQ9P107 970 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 SERTAD1Q9UHV2 236 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 CHD8Q9HCK8 2581 aa17.23■□□□□ 0.35
CLTA-203ENST00000396603 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 CDX4O14627 284 aaPredicted RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 TULP3O75386 442 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 KRT37O76014 449 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 ZNF202O95125 648 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 NR3C1P04150 777 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 HNRNPLP14866 589 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLTA-203ENST00000396603 DHPSP49366 369 aaPredicted RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 NOVA1P51513 510 aaKnown RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 MESP2Q0VG99 397 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 MAP7D1Q3KQU3 841 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 SLC23A3Q6PIS1 610 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms