RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NUMA1Q14980 2115 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 E2F8A0AVK6 867 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 PRRT4C9JH25 899 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 GFRA2O00451 464 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 GABRDO14764 452 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 HCRTO43612 131 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 NTRK1P04629 796 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 MATR3P43243 847 aaKnown RBP eCLIP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 CSNK1EP49674 416 aaKnown RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 SV2CQ496J9 727 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 PREPLQ4J6C6 727 aaPredicted RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 COLEC12Q5KU26 742 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 FBXL19Q6PCT2 694 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 CHPFQ8IZ52 775 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 CXorf38Q8TB03 319 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 WASF1Q92558 559 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 ERLEC1Q96DZ1 483 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 MKRN2Q9H000 416 aaKnown RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 MIR1-1HGQ9H1L0 117 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 DDX43Q9NXZ2 648 aaKnown RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 EIF2B4Q9UI10 523 aaKnown RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 DNM3Q9UQ16 869 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 SNX11Q9Y5W9 270 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 CYP46A1Q9Y6A2 500 aa14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 TRAK2O60296 914 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 BRINP1O60477 761 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 JUPP14923 745 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 PPP3CCP48454 512 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 SMTNP53814 917 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 KCNH2Q12809 1159 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 LY6DQ14210 128 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 SCARA3Q6AZY7 606 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 DENND5BQ6ZUT9 1274 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 SKAP1Q86WV1 359 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 TMEM25Q86YD3 366 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 SCN4BQ8IWT1 228 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 IGSF8Q969P0 613 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 OSGEPQ9NPF4 335 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 LRWD1Q9UFC0 647 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 AK5Q9Y6K8 562 aa14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 USP9YO00507 2555 aaPredicted RBP14.61□□□□□ -0.07
VCPKMT-201ENST00000395859 ARID1BQ8NFD5 2236 aaPredicted RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 WASH3PC4AMC7 463 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 HNRNPDLO14979 420 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 ZBTB24O43167 697 aaPredicted RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 SLC28A2O43868 658 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 C1SP09871 688 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 C7P10643 843 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 CDK4P11802 303 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 HNF1BP35680 557 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 LIG4P49917 911 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 TPMTP51580 245 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 AFF3P51826 1226 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 NOP14P78316 857 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 POU5F1Q01860 360 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 CCDC173Q0VFZ6 552 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 ENPP2Q13822 863 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 SF3A1Q15459 793 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 ZNF174Q15697 407 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 TBC1D25Q3MII6 688 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 CCDC157Q569K6 752 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 KCNT1Q5JUK3 1230 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 VSTM1Q6UX27 236 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 LIMS2Q7Z4I7 341 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 SPATA2LQ8IUW3 424 aaPredicted RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 CACTIN-AS1Q8N1I8 211 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 TMEM86AQ8N2M4 240 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 SNX29Q8TEQ0 813 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 WBP2Q969T9 261 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 MMTAG2Q9BU76 263 aaKnown RBP14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
VCPKMT-201ENST00000395859 H0Y8X5 98 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 CACNG3O60359 315 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 GREM1O60565 184 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 GRIK1P39086 918 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 ACADVLP49748 655 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 CCT8P50990 548 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 MYL7Q01449 175 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 RAD51AP2Q09MP3 1159 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 FUT11Q495W5 492 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 KIAA1324Q6UXG2 1013 aaKnown RBP14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 CRELD2Q6UXH1 353 aaPredicted RBP14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 NUDT18Q6ZVK8 323 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 BBS7Q8IWZ6 715 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 TSC1Q92574 1164 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 BICD1Q96G01 975 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 MED8Q96G25 268 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 HIC2Q96JB3 615 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 PCED1AQ9H1Q7 454 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 GDAP2Q9NXN4 497 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 FTSJ1Q9UET6 329 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 IL17BQ9UHF5 180 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
VCPKMT-201ENST00000395859 CKAP5Q14008 2032 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms