RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ESYT3A0FGR9 886 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 RIPK2O43353 540 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 GAS8O95995 478 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 PAFAH1B3Q15102 231 aaKnown RBP14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 CLLU1OSQ5K130 101 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 FUBP3Q96I24 572 aaKnown RBP eCLIP14.83□□□□□ -0.038e-7■□□□□ 9.2
CDC42SE2-202ENST00000395246 TRIM62Q9BVG3 475 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 SNX25Q9H3E2 840 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 PCDH18Q9HCL0 1135 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 FNIP2Q9P278 1114 aa14.83□□□□□ -0.03
CDC42SE2-202ENST00000395246 TTC3P53804 2025 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 HTTP42858 3142 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 RNF40O75150 1001 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ELNP15502 786 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 DAOAP59103 153 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 FRG1Q14331 258 aaKnown RBP14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ATP6V1G3Q96LB4 118 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ADAM21Q9UKJ8 722 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 HACD1B0YJ81 288 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 KRT1P04264 644 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 SELPP16109 830 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZFXP17010 805 aaPredicted RBP14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 PCSK1P29120 753 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 SMARCB1Q12824 385 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 DPYSQ14117 519 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ATP13A4Q4VNC1 1196 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 TIGD5Q53EQ6 642 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ERMARDQ5T6L9 678 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZFP42Q96MM3 310 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 RETREG1Q9H6L5 497 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 WDR6Q9NNW5 1121 aaKnown RBP14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 ACTL7BQ9Y614 415 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 DENND4CQ5VZ89 1909 aa14.83□□□□□ -0.04
CDC42SE2-202ENST00000395246 TMEM110-MUSTN1A8MSY1 372 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 CD19P15391 556 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 THPOP40225 353 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 PMS2P54278 862 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 P3H1Q32P28 736 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 FAM102AQ5T9C2 384 aaPredicted RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 FAM35AQ86V20 835 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 UBA3Q8TBC4 463 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 TRMT13Q9NUP7 481 aaKnown RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 DNPEPQ9ULA0 475 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 DOCK4Q8N1I0 1966 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 ANKRD20A8PQ5CZ79 823 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 DDX42Q86XP3 938 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 SLC2A14Q8TDB8 520 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 SMARCD1Q96GM5 515 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 CASD1Q96PB1 797 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 GAD1Q99259 594 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 ARHGEF38Q9NXL2 777 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 PTPN22Q9Y2R2 807 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 ALOX15BO15296 676 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 CACNG3O60359 315 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 GCATO75600 419 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 FGFR3P22607 806 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 RFC2P35250 354 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 AFF1P51825 1210 aaKnown RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 DMTNQ08495 405 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 TFDP2Q14188 446 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 ACBD5Q5T8D3 534 aaPredicted RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZNF449Q6P9G9 518 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 C2orf15Q8WU43 125 aaKnown RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 PRCCQ92733 491 aaPredicted RBP14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 C8orf48Q96LL4 319 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 GOLGA2P5Q9HBQ8 144 aa14.82□□□□□ -0.04
CDC42SE2-202ENST00000395246 NYNRINQ9P2P1 1898 aaKnown RBP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 RNF8O76064 485 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 C1QAP02745 245 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 CCDC130P13994 396 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 GRK4P32298 578 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 KCNJ11Q14654 390 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 PRKD1Q15139 912 aaPredicted RBP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 GLRA4Q5JXX5 417 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 MANEALQ5VSG8 457 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 MSANTD2Q6P1R3 559 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 ZNF296Q8WUU4 475 aaPredicted RBP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 TMEM30AQ9NV96 361 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 CARNS1A5YM72 827 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 DAB2IPQ5VWQ8 1189 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 AFMIDQ63HM1 303 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 PIGZQ86VD9 579 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 SYT15Q9BQS2 421 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 PLAAQ9Y263 795 aa14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 ATXN2Q99700 1313 aaKnown RBP14.81□□□□□ -0.04
CDC42SE2-202ENST00000395246 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 BEST1O76090 585 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 CYP2C18P33260 490 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 GLUD2P49448 558 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 SNX30Q5VWJ9 437 aa14.8□□□□□ -0.04
CDC42SE2-202ENST00000395246 ANKLE1Q8NAG6 615 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms