RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CACNA2D3Q8IZS8 1091 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 PLD5Q8N7P1 536 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 C11orf84Q9BUA3 381 aaPredicted RBP14.56□□□□□ -0.08
SNCA-204ENST00000394989 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 DNM1LO00429 736 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 FSBPO95073 299 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 KCNE1P15382 129 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 IGFBP6P24592 240 aaPredicted RBP14.56□□□□□ -0.08
SNCA-204ENST00000394989 HOXC8P31273 242 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 CPT1AP50416 773 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 ATXN1P54253 815 aaKnown RBP14.56□□□□□ -0.08
SNCA-204ENST00000394989 TMED2Q15363 201 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 SNCBQ16143 134 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 LIMS2Q7Z4I7 341 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 CRYBG2Q8N1P7 616 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 STK32AQ8WU08 396 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 SNRNP25Q9BV90 132 aaKnown RBP14.56□□□□□ -0.08
SNCA-204ENST00000394989 KCNK9Q9NPC2 374 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 GDAP2Q9NXN4 497 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 HESX1Q9UBX0 185 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 GGT7Q9UJ14 662 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 IPPQ9Y573 584 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 ADORA2BP29275 332 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 SDC4P31431 198 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 ANKRD42Q8N9B4 389 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 P3H4Q92791 437 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 MAGEB5Q9BZ81 275 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 PCDH18Q9HCL0 1135 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 E7ESA3 106 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 RPL34P49207 117 aaKnown RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 ACCSLQ4AC99 568 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 CYB5D1Q6P9G0 228 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 C1orf228Q6PIY5 440 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 TDRPQ86YL5 185 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 RASAL3Q86YV0 1011 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 ANKRD52Q8NB46 1076 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 PCDH19Q8TAB3 1148 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 MAK16Q9BXY0 300 aaKnown RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 VPS37BQ9H9H4 285 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 USP29Q9HBJ7 922 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 RASA4BC9J798 803 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 POC1B-GALNT4F8VUJ3 575 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 RASA4O43374 803 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 PIAS1O75925 651 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 UPP2O95045 317 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 CRYBB1P53674 252 aaPredicted RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 PURAQ00577 322 aaKnown RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 BOLA3Q53S33 107 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 ANKRD20A8PQ5CZ79 823 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 C17orf99Q6UX52 265 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 TRABD2AQ86V40 505 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 PARP9Q8IXQ6 854 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
SNCA-204ENST00000394989 KIF9Q9HAQ2 790 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 ACTL7BQ9Y614 415 aa14.55□□□□□ -0.08
SNCA-204ENST00000394989 MYADML2A6NDP7 307 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 MAP3K6O95382 1288 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 CD4P01730 458 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 TKTP29401 623 aaKnown RBP14.54□□□□□ -0.08
SNCA-204ENST00000394989 SSTR1P30872 391 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 ROR1Q01973 937 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 BST2Q10589 180 aaKnown RBP14.54□□□□□ -0.08
SNCA-204ENST00000394989 TEKT4Q8WW24 435 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 PHACTR1Q9C0D0 580 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 RABGEF1Q9UJ41 708 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 MCM8Q9UJA3 840 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 C17orf102A2RUQ5 167 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 VIMP08670 466 aaKnown RBP14.54□□□□□ -0.08
SNCA-204ENST00000394989 KRT81Q14533 505 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 EFTUD2Q15029 972 aaKnown RBP eCLIP14.54□□□□□ -0.08
SNCA-204ENST00000394989 PDK2Q15119 407 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 SLC9A4Q6AI14 798 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 DARS2Q6PI48 645 aaKnown RBP14.54□□□□□ -0.08
SNCA-204ENST00000394989 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 ZDHHC17Q8IUH5 632 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 GDAP1Q8TB36 358 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 SLC2A14Q8TDB8 520 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 LRRN4Q8WUT4 740 aa14.54□□□□□ -0.08
SNCA-204ENST00000394989 XPO7Q9UIA9 1087 aaKnown RBP14.54□□□□□ -0.08
SNCA-204ENST00000394989 MEIS3P2A8K0S8 358 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 PTGESO14684 152 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 NDC80O14777 642 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 MDM4O15151 490 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 EZRP15311 586 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 CTGFP29279 349 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 BCAT1P54687 386 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 LILRA4P59901 499 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 BASP1P80723 227 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 TFDP2Q14188 446 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 PKN2Q16513 984 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 SYCP2LQ5T4T6 812 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 SLC26A9Q7LBE3 791 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 OSTM1Q86WC4 334 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms