RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	CDH6	P55285	790 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	MAGOH	P61326	146 aa	Known RBP	9.63	□□□□□ -0.87
MITF-205	ENST00000394348	GPS1	Q13098	491 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	NR1H3	Q13133	447 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	XRCC4	Q13426	336 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	KRT81	Q14533	505 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	DSC3	Q14574	896 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	LLGL1	Q15334	1064 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	DPYSL2	Q16555	572 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PTGIS	Q16647	500 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	SMTNL2	Q2TAL5	461 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	SLC9A4	Q6AI14	798 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	CCSAP	Q6IQ19	270 aa	Predicted RBP	9.63	□□□□□ -0.87
MITF-205	ENST00000394348	CXCL17	Q6UXB2	119 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PPP1R21	Q6ZMI0	780 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	CCDC25	Q86WR0	208 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	TDRP	Q86YL5	185 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PPIL6	Q8IXY8	311 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	SMC1B	Q8NDV3	1235 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	FAM172A	Q8WUF8	416 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	RSAD2	Q8WXG1	361 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	HAUS1	Q96CS2	278 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PGBD4	Q96DM1	585 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	CFAP57	Q96MR6	1250 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	UROC1	Q96N76	676 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	RNF157	Q96PX1	679 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	RBM15	Q96T37	977 aa	Known RBP eCLIP	9.63	□□□□□ -0.87
MITF-205	ENST00000394348	DDX23	Q9BUQ8	820 aa	Known RBP	9.63	□□□□□ -0.87
MITF-205	ENST00000394348	FAM107B	Q9H098	131 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	CENPH	Q9H3R5	247 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	DPEP3	Q9H4B8	488 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	XPNPEP3	Q9NQH7	507 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	9.63	□□□□□ -0.87
MITF-205	ENST00000394348	KLK14	Q9P0G3	267 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PCSK1N	Q9UHG2	260 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	GGA2	Q9UJY4	613 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PRDM4	Q9UKN5	801 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	GABRQ	Q9UN88	632 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	ACTL7B	Q9Y614	415 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	PTCH2	Q9Y6C5	1203 aa		9.63	□□□□□ -0.87
MITF-205	ENST00000394348	SF3B1	O75533	1304 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	COL4A4	P53420	1690 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348		A0A087WUV0	522 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348		E7ESA3	106 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	TULP2	O00295	520 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	APOL1	O14791	398 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ALOX15B	O15296	676 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CDH16	O75309	829 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	GNRH1	P01148	92 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CHRNA1	P02708	482 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CYP11A1	P05108	521 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CCDC130	P13994	396 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PTPN1	P18031	435 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	HOXD10	P28358	340 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PCSK1	P29120	753 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	MATK	P42679	507 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	MAGEA4	P43358	317 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	NR2C2	P49116	596 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ATP1A2	P50993	1020 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	HNRNPH2	P55795	449 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	HDAC4	P56524	1084 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	EIF3E	P60228	445 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ROR1	Q01973	937 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CACNB2	Q08289	660 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	MMRN1	Q13201	1228 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	AUH	Q13825	339 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	TRIP13	Q15645	432 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	C15orf59	Q2T9L4	293 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	KCNT1	Q5JUK3	1230 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ERMARD	Q5T6L9	678 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	MAP3K21	Q5TCX8	1036 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CENPU	Q71F23	418 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	BNIPL	Q7Z465	357 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	OSTM1	Q86WC4	334 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	FUK	Q8N0W3	1084 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	SCML4	Q8N228	414 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	GSTCD	Q8NEC7	633 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	SLC2A14	Q8TDB8	520 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	HSPH1	Q92598	858 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PRCC	Q92733	491 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	P3H4	Q92791	437 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ACSF2	Q96CM8	615 aa	Predicted RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PIWIL1	Q96J94	861 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CALN1	Q9BXU9	219 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	SEZ6L	Q9BYH1	1024 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CCDC134	Q9H6E4	229 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PCDH18	Q9HCL0	1135 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	TMEM51	Q9NW97	253 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	RRN3	Q9NYV6	651 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	PAK5	Q9P286	719 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	BCCIP	Q9P287	314 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	DSE	Q9UL01	958 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	CDH9	Q9ULB4	789 aa		9.62	□□□□□ -0.87
MITF-205	ENST00000394348	ABT1	Q9ULW3	272 aa	Known RBP	9.62	□□□□□ -0.87
MITF-205	ENST00000394348	TSC2	P49815	1807 aa		9.61	□□□□□ -0.87
MITF-205	ENST00000394348		A0A0U1RQF3	1178 aa		9.61	□□□□□ -0.87
MITF-205	ENST00000394348	BCLAF3	A2AJT9	711 aa	Known RBP	9.61	□□□□□ -0.87
MITF-205	ENST00000394348	MOXD2P	A6NHM9	499 aa		9.61	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms