RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 ZNF394Q53GI3 561 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF667Q5HYK9 610 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 KCNT1Q5JUK3 1230 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 DCAF15Q66K64 600 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 OR52E8Q6IFG1 317 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 AAGABQ6PD74 315 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TIFABQ6ZNK6 161 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TSHZ1Q6ZSZ6 1077 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 SESTD1Q86VW0 696 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 CRLF3Q8IUI8 442 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 CEP120Q8N960 986 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF280CQ8ND82 737 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TEKT4Q8WW24 435 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 NRG4Q8WWG1 115 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 GATA6Q92908 595 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 IFT43Q96FT9 208 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF184Q99676 751 aaPredicted RBP10.4□□□□□ -0.75
COL17A1-203ENST00000393211 CALN1Q9BXU9 219 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 GCOM2Q9BZD3 368 aaPredicted RBP10.4□□□□□ -0.75
COL17A1-203ENST00000393211 KLC2Q9H0B6 622 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 SDCBP2Q9H190 292 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 USP29Q9HBJ7 922 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 ARHGEF4Q9NR80 690 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 FBXO6Q9NRD1 293 aaPredicted RBP10.4□□□□□ -0.75
COL17A1-203ENST00000393211 KIAA1257Q9ULG3 409 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 TELO2Q9Y4R8 837 aa10.4□□□□□ -0.75
COL17A1-203ENST00000393211 COL4A5P29400 1685 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 FAM237BA0A1B0GVD1 139 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 SNNO75324 88 aaPredicted RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 APBA3O96018 575 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 APOEP02649 317 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ERBB2P04626 1255 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 PRKCBP05771 671 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 SERPINA6P08185 405 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 CD48P09326 243 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 HARSP12081 509 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 GPD1P21695 349 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 OSBPP22059 807 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 AP2B1P63010 937 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 TMPRSS15P98073 1019 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ROR2Q01974 943 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 SP2Q02086 613 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 RCN2Q14257 317 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 TEX44Q53QW1 395 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 BOLA3Q53S33 107 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 MPZL3Q6UWV2 235 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 MYLK4Q86YV6 388 aaPredicted RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ARHGAP18Q8N392 663 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 GALNT15Q8N3T1 639 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 CHST13Q8NET6 341 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 WDR60Q8WVS4 1066 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 PRPF31Q8WWY3 499 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 WNK4Q96J92 1243 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 CPXM1Q96SM3 734 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 TBCBQ99426 244 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 NMUR2Q9GZQ4 415 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 C12orf65Q9H3J6 166 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 POPDC2Q9HBU9 364 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ALG13Q9NP73 1137 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ZC3H7BQ9UGR2 993 aaKnown RBP10.39□□□□□ -0.75
COL17A1-203ENST00000393211 CYTH4Q9UIA0 394 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 PLA2G4CQ9UP65 541 aa10.39□□□□□ -0.75
COL17A1-203ENST00000393211 H7C0C1 242 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 DPYSL4O14531 572 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 RFPL1O75677 317 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TGFB3P10600 412 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 VDRP11473 427 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 P4HA1P13674 534 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TPSB2P20231 275 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PEX19P40855 299 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 ATP5OP48047 213 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 STAT5BP51692 787 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 CDH6P55285 790 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 SESN3P58005 492 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 ACTR3P61158 418 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TFAMQ00059 246 aaKnown RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 BST1Q10588 318 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 DGKZQ13574 1117 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 THOC5Q13769 683 aaKnown RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TMEM132BQ14DG7 1078 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 NUDCD3Q8IVD9 361 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 ACMSDQ8TDX5 336 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 AFG1LQ8WV93 481 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 HSPH1Q92598 858 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms