RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 EPAS1Q99814 870 aa14.54□□□□□ -0.08
CCDC57-203ENST00000392343 GORASP1Q9BQQ3 440 aa14.54□□□□□ -0.08
CCDC57-203ENST00000392343 JPH1Q9HDC5 661 aaPredicted RBP14.54□□□□□ -0.08
CCDC57-203ENST00000392343 KCNK4Q9NYG8 393 aa14.54□□□□□ -0.08
CCDC57-203ENST00000392343 ZC3H7BQ9UGR2 993 aaKnown RBP14.54□□□□□ -0.08
CCDC57-203ENST00000392343 MAD1L1Q9Y6D9 718 aa14.54□□□□□ -0.08
CCDC57-203ENST00000392343 OPHN1O60890 802 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 ASS1P00966 412 aaKnown RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 KRT7P08729 469 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 ROR1Q01973 937 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 NET1Q7Z628 596 aaPredicted RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 RSPH3Q86UC2 560 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 VSIG10LQ86VR7 867 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 SLC26A7Q8TE54 656 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 GJD4Q96KN9 370 aaPredicted RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 PDP2Q9P2J9 529 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 SLC17A6Q9P2U8 582 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 TTLL3Q9Y4R7 772 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 E2F8A0AVK6 867 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 KCNN4O15554 427 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 RFPL1O75677 317 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 ASNSP08243 561 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 SNRPAP09012 282 aaKnown RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 CSH1P0DML2 217 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 CSH2P0DML3 217 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 GMPRP36959 345 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 CDH6P55285 790 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 TGFB2P61812 414 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 YWHAZP63104 245 aaKnown RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 RNF111Q6ZNA4 994 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 DENND5BQ6ZUT9 1274 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 CRLF3Q8IUI8 442 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
CCDC57-203ENST00000392343 ZFAND2BQ8WV99 257 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 ATG4CQ96DT6 458 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 CCDC106Q9BWC9 280 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 GPATCH2LQ9NWQ4 482 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 PACSIN3Q9UKS6 424 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 WDR81Q562E7 1941 aa14.53□□□□□ -0.08
CCDC57-203ENST00000392343 APOC4-APOC2K7ER74 178 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 ITM2AO43736 263 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 APOC2P02655 101 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 KRT19P08727 400 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 SP2Q02086 613 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 TRPC3Q13507 836 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 SFT2D3Q587I9 215 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 POLNQ7Z5Q5 900 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 UNC5BQ8IZJ1 945 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 PEBP4Q96S96 227 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 WWP1Q9H0M0 922 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 RNF146Q9NTX7 359 aa14.52□□□□□ -0.08
CCDC57-203ENST00000392343 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.52□□□□□ -0.08
CCDC57-203ENST00000392343 LOC100653049A0A140TA62 436 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 ZMPSTE24O75844 475 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 KRT34O76011 436 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 KRT37O76014 449 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 ERBB2P04626 1255 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 SPATA31D3P0C874 917 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 CUL3Q13618 768 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 C15orf59Q2T9L4 293 aaPredicted RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 TRMT5Q32P41 509 aaKnown RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 SPATA31D4Q6ZUB0 917 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 MPP5Q8N3R9 675 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 UBR7Q8N806 425 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 NIPA2Q8N8Q9 360 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 CEP120Q8N960 986 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 UBE2OQ9C0C9 1292 aaKnown RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 PLAC1Q9HBJ0 212 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 PIH1D1Q9NWS0 290 aaKnown RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 USP18Q9UMW8 372 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 STYXL1Q9Y6J8 313 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 KIAA1217Q5T5P2 1943 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 A0A088AWK7 358 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 F8W8V4 182 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 H0YIN7 160 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 TXNDC9O14530 226 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 NDC80O14777 642 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 LSM8O95777 96 aaKnown RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 CCND2P30279 289 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 ASPHQ12797 758 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 KCNJ11Q14654 390 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 ATG16L1Q676U5 607 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 THNSL1Q8IYQ7 743 aa14.52□□□□□ -0.09
CCDC57-203ENST00000392343 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.09
CCDC57-203ENST00000392343 COL11A2P13942 1736 aaPredicted RBP14.51□□□□□ -0.09
CCDC57-203ENST00000392343 A6NJR5 290 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 C1QAP02745 245 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 EIF4BP23588 611 aaKnown RBP14.51□□□□□ -0.09
CCDC57-203ENST00000392343 RBL1P28749 1068 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 TEX44Q53QW1 395 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 SLFN12LQ6IEE8 588 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 SCYL2Q6P3W7 929 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 C7orf26Q96N11 449 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 SPATA16Q9BXB7 569 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 NIF3L1Q9GZT8 377 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 ADAMTS6Q9UKP5 1117 aa14.51□□□□□ -0.09
CCDC57-203ENST00000392343 HBS1LQ9Y450 684 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms