RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SUMO3P55854 103 aaPredicted RBP2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 FOXO1Q12778 655 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TARDBPQ13148 414 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 PRKG2Q13237 762 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 SPARCL1Q14515 664 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 PLS1Q14651 629 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 STARD3Q14849 445 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TAF11Q15544 211 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 CNGA2Q16280 664 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TXNRD1Q16881 649 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 ERCC6LQ2NKX8 1250 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 ARHGAP15Q53QZ3 475 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 FAAH2Q6GMR7 532 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 ITPRIPL1Q6GPH6 555 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 PGBD2Q6P3X8 592 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 USP49Q70CQ1 688 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 NUP133Q8WUM0 1156 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 IPCEF1Q8WWN9 437 aaPredicted RBP2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 RFKQ969G6 155 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 REPS1Q96D71 796 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 RAX2Q96IS3 184 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 VKORC1Q9BQB6 163 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 CNPPD1Q9BV87 410 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 AP1M1Q9BXS5 423 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 BRD9Q9H8M2 597 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 SMURF2Q9HAU4 748 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TBCCD1Q9NVR7 557 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TMEM160Q9NX00 188 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 NKIRAS2Q9NYR9 191 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 KIF17Q9P2E2 1029 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 MYO1AQ9UBC5 1043 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 AASSQ9UDR5 926 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 TBC1D29Q9UFV1 150 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 FEM1BQ9UK73 627 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 SLC39A10Q9ULF5 831 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 SLC45A2Q9UMX9 530 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 GPR34Q9UPC5 381 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 MAN2B2Q9Y2E5 1009 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 BTBD3Q9Y2F9 522 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 PCDHA3Q9Y5H8 950 aa2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 RSF1Q96T23 1441 aaPredicted RBP2.48□□□□□ -2.01
SNORA40.19-201ENST00000390846 CDHR4A6H8M9 788 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 GOLGA6L3A6NEY3 463 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PGPEP1LA6NFU8 196 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 LINC00473A8K010 186 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SYT5O00445 386 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 ZNF213O14771 459 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 YY2O15391 372 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 P4HA2O15460 535 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 HOXC11O43248 304 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 MGEA5O60502 916 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PTP4A3O75365 173 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 FAM155BO75949 473 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 URI1O94763 535 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 IL18RAPO95256 599 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 FTLP02792 175 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PARP1P09874 1014 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 IL1R1P14778 569 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 IL2RBP14784 551 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 ECHS1P30084 290 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 ACTN2P35609 894 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 GRIA3P42263 894 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 TOB1P50616 345 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 HK3P52790 923 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PRKAA2P54646 552 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 MALLQ13021 153 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 EIF2B5Q13144 721 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SNAPC2Q13487 334 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 CUL4BQ13620 913 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 KLF9Q13886 244 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PRKG1Q13976 671 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PDE1CQ14123 709 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 KRT32Q14532 448 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PTPRRQ15256 657 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SMAD1Q15797 465 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PKN2Q16513 984 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 CDC37Q16543 378 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 ARL13BQ3SXY8 428 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 FAM133BQ5BKY9 247 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 EPHA10Q5JZY3 1008 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 GJC2Q5T442 439 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 RRAGBQ5VZM2 374 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 HAUS3Q68CZ6 603 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 TANGO2Q6ICL3 276 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 CCDC129Q6ZRS4 1044 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 RFX8Q6ZV50 586 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 PPP1R3BQ86XI6 285 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 GALNT15Q8N3T1 639 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 CCDC33Q8N5R6 958 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 ATP11CQ8NB49 1132 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 GLIS1Q8NBF1 620 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SCAMP5Q8TAC9 235 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 MYCBPAPQ8TBZ2 947 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 KCNG4Q8TDN1 519 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 CREB3L4Q8TEY5 395 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 AUTS2Q8WXX7 1259 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 TFAP2BQ92481 460 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SMG7Q92540 1137 aaKnown RBP2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 FATE1Q969F0 183 aa2.47□□□□□ -2.01
SNORA40.19-201ENST00000390846 SH3KBP1Q96B97 665 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms